KEGG   Hippocampus comes (tiger tail seahorse): 109532229
Entry
109532229         CDS       T04969                                 
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X1
  KO
K12649  ATP-dependent RNA helicase DHX58 [EC:5.6.2.6]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    109532229 (dhx58)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:hcq04054]
    109532229 (dhx58)
Enzymes [BR:hcq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     109532229 (dhx58)
Pattern recognition receptors [BR:hcq04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   109532229 (dhx58)
SSDB
Motif
Pfam: RIG-I_C-RD RIG-I_C DEAD ResIII Helicase_C SWI2_SNF2 AAA_22 AAA_19 nSTAND3 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 109532229
NCBI-ProteinID: XP_019752532
Position
Unknown
AA seq 709 aa
MSQMRHWDLALLSILHKPQSHFKKKKIDVFRDRRVAMSDLVLYGYQEEVVQRALQGENII
VWLPTGAGKTRAAVFVAHKHLERTPGAKVVVLVNTVHLVDQHYSKEFHPALGHHYAVTAV
SSDSDRKDFLGLVLRDKDVLVCTAQILLNALTSNEEAKHVELSDITLLVVDECHHTHKET
VYNKIMRLYLEKKMRGDKRLPQVLGLTASPGSGGAKSLDKAVQYVLQICANLDCAIVCTK
NCTEELNMKVPKPVKRFDIVEERQEDPFGDHVQWMMRQIHCFMQPPEDFIPREFGTQDYE
SNIVALQKRGVEECNRRLIRCAIHLREYNDALLINDTLLMEDALCSLKDFYRETTIIDDT
DRFLVNLFQDNQAKLTTLARDLRFTNPKMEQLESTLRRHFSPSVESRGIVFSKTRKSTSC
LHQWVLANDSLRSAGIKSAIITGSAGMTQQDRDKTIRNFRLGSVNLLIATSVAEEGLDIP
QCNLVVRYGLLTNEIAQQQANRRARAQDSHYSLVAERGSREERREHLNTYLAGLTAKAVD
KIHQMSPREFRANIDELQARAMLCNRMAEIQMMEKNGRYLSANVQLLCGNCLTAVAQGSD
IQLLDNMHYVNVNPQFRRHYKKGSPVLLKKTFEDWEPGCRIKCNNGNCNKQWGYEIKFRK
VALLPNVAIKDFALQTPSGRTTVKKWKDVPFTVEHFSFSEYCHQHLLDS
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgtcccaaatgcgtcattgggatttggctttattatctattttgcacaagccacaaagc
cactttaaaaaaaagaaaatcgatgtcttccgcgatagacgtgtcgcgatgtcagatctg
gtcctgtacgggtaccaggaggaggtggtccagagggctttgcaaggggagaacatcatc
gtgtggctgcccacgggagcggggaagacgcgagccgctgtcttcgtggcccacaagcac
ctggagaggacgcctggggccaaagtggtggtccttgtcaatacggtgcacctggtggac
cagcactacagcaaagagttccatcccgccctggggcaccattatgctgtcacggcagtg
agcagcgacagcgacagaaaggacttcctgggattggtgctgcgtgacaaggatgtactt
gtgtgcacggcgcagatcctcctgaacgccctcaccagcaatgaggaagccaagcacgtg
gagctctcagacatcaccctgctggtggtggacgagtgccatcacacgcacaaggagacg
gtgtacaacaagatcatgaggctctacctggagaagaagatgaggggcgacaaacggctg
ccccaggtcctcggccttacagcgtcgccgggatcgggaggagccaaaagtctggacaag
gctgtgcagtatgtacttcagatctgtgccaacttggactgtgccatcgtatgcaccaaa
aactgcaccgaggagctcaacatgaaagtacccaaacccgtgaaaaggtttgacattgtg
gaggaaaggcaggaagatccatttggtgaccatgtacagtggatgatgcgacaaatccac
tgcttcatgcagcctcccgaggacttcatcccccgagagtttggcacgcaagattacgag
agcaacatagtcgcattgcaaaagagaggtgtggaggagtgcaacaggcgactgatacga
tgtgccatccacctgcgcgagtacaatgacgcgctgctgatcaacgacacactgctgatg
gaggacgcgctgtgttctctgaaggacttctacagagagaccaccatcatcgacgacacc
gaccgtttcctggtgaatcttttccaagataaccaagccaaactgacgacgttggcgcgc
gacctgcgtttcacaaaccccaagatggagcagctggagagcaccctgcggaggcacttc
tctcccagcgtagagtccagaggaatcgtcttcagcaagacccgcaagagcacgtcctgc
ctgcaccagtgggtgctcgccaacgacagcctgcgctcagccggcatcaagtccgccatc
ataaccggcagcgccggcatgacacagcaagatcgcgacaaaaccatccggaacttccgc
ctgggctccgtcaatctcctgattgccaccagcgtggccgaagagggcctggacatcccc
cagtgcaacctggtggtgcgttacggcctgctgaccaacgagattgcccagcagcaggct
aaccgtcgcgcccgcgcccaagacagccactactctctcgtggcagagcgcggcagccgc
gaggagcgacgcgagcacctcaacacttacctggcgggcctcaccgccaaagccgtcgac
aagatccaccagatgagcccgagagagttcagagcaaacatcgacgagctccaggcgcgg
gcgatgctttgcaaccggatggcggagatccagatgatggagaagaacggtcgctacttg
tccgccaacgtccagctgctgtgcggcaactgtttgacggcagtggcgcaaggcagcgac
atccagctgttggacaacatgcattatgtcaacgtcaacccgcaattcaggaggcactac
aagaagggctctccggtccttctgaagaagacgtttgaggactgggagcccggctgccgc
atcaagtgcaacaacggcaactgcaacaagcaatggggctatgagataaagttccgcaaa
gtggcactcctgcccaatgtggccattaaagacttcgccctgcagacacccagcggcagg
accaccgtcaagaagtggaaggacgtcccgttcaccgtggagcacttcagcttcagcgaa
tactgccatcaacacctcctggactcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (10)   
   Pfam (10)   
All databases (46)   

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