KEGG   Halomonas campaniensis: FF32_14315
Entry
FF32_14315        CDS       T03198                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
hcs  Halomonas campaniensis
Pathway
hcs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hcs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FF32_14315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcs03019]
    FF32_14315
Enzymes [BR:hcs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     FF32_14315
Messenger RNA biogenesis [BR:hcs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     FF32_14315
SSDB
Motif
Pfam: DEAD Helicase_C AAA_19 ResIII P-loop_SecA AAA_22 Sacchrp_dh_NADP FANCF
Other DBs
NCBI-ProteinID: AIA75974
Position
complement(3111991..3113247)
AA seq 418 aa
MSFSELGLHDDLLRAVTAQGYTQPTPIQQKAIPVVLEGRDMLASAQTGTGKTAGFTLPML
QRLANGKRPGKRQVRALVLTPTRELAAQVGESVTAYGKHLSLRSHIIFGGVGQQPQVDAL
KAGLDVLVATPGRLLDLHQQGHVDLSAVEILVLDEADRMLDMGFIHDIKRLLRLVPKQRQ
NLLFSATFSNDIQLLAQQLLNNPALIEVAPRNTTAEKIEQTIYRVDRDKKRELLAHLIQQ
HGWFQILVFTRTKHGANRLAEQLSKQDIPAMAIHGNKSQGARTRALGAFKSGDLQVLVAT
DIAARGLDINELPHVVNFDLPNVAEDYVHRIGRTGRAGSDGEAVSLVCVDEHGLLSGIER
LIKQNLPKRIEPGFEPDPNAKPEPIENGRRGQKQPRAKRKPEGQAANTGGERRRRARR
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgagcttttctgaacttggtctgcacgacgatttactacgcgcggttaccgcgcagggc
tatacgcagcctacccctattcaacaaaaagctatccccgttgtacttgaaggtcgcgac
atgctcgccagtgcccaaactggcacaggcaaaaccgctggctttacgttacccatgtta
cagcggttagcgaatggaaaacgtcccggcaaacgccaagtacgcgcgttagtgctcacg
cctacgcgtgagcttgctgcccaggtaggcgaaagcgtaaccgcttacggcaagcacctc
tctttacgctcgcatattattttcggcggtgttggccaacagccacaagtggatgcactc
aaagcggggcttgatgtattggtcgccacgccaggtcggctactagacttgcatcagcag
ggccacgtggatctatcggccgtcgaaatcctggtgctcgacgaagctgaccgcatgctc
gacatgggattcatccatgatatcaagcgcctattgcgtttagtgccaaaacagcgtcaa
aatctgctgttctctgcaacattctccaacgacatacaattattggcgcaacagttgctc
aacaatcccgcgttaatagaagtcgcacctcgcaacacgaccgctgaaaaaattgagcaa
accatttaccgagtagatcgtgataaaaaacgcgagctgctggcccatttaattcagcag
catggctggtttcagatactcgttttcacacgcaccaaacatggcgcaaaccgcttagca
gagcagctttctaagcaagacatacctgccatggccatccatggcaataagagccaaggg
gctagaacacgtgctctaggtgctttcaaaagcggtgatttgcaggtacttgtcgccact
gacattgccgctcgcgggctagatatcaacgaacttccccatgtcgttaatttcgactta
cccaatgtggcagaggactatgttcaccgtattggacgtaccggccgagcgggcagcgat
ggagaagcagtttcgctcgtatgtgtcgacgaacacggtttgctgagtgggattgagcgt
cttatcaagcaaaacctgcctaaacgtatcgaacccggttttgaacctgatcccaacgcc
aagcccgagccgattgaaaatggccgccgtggtcagaagcagccccgcgccaagcgtaaa
ccggaaggacaagcagccaatactggcggtgaacgtcgtcgtcgcgcccgtcgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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