KEGG   Natronorubrum daqingense: BB347_07290
Entry
BB347_07290       CDS       T04679                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
hda  Natronorubrum daqingense
Pathway
hda03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    BB347_07290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hda03400]
    BB347_07290
DNA repair and recombination proteins [BR:hda03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     BB347_07290
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_14 AAA_27 AAA_23 ORC_WH_C AAA_29
Other DBs
NCBI-ProteinID: APX96436
UniProt: A0A1N7E9H5
Position
1489603..1492404
AA seq 933 aa
MDPALGPPEKMAEKRDELTPMMRQYHDLCARYDDALVLFQVGDFYEAFCGAAERTARLLE
IALTSREDSTGEYPMAGIPIDNAESYIETLLEAGYRVAVADQVEEPGESPGVVERAVTRV
ITPGTLTEDELLASDDNNFVAALAGDPHSSGQTEDELALALLDVSTGDFLATSSSANETI
ADEVSRFDPSEAIVGPNAPTDLLPETCMVTPFDPNTFERERAEDTLSQYVRNPDALLASA
VEISVCGALLAYAEYVRGGAHEGERGEDERSGGDDGDGANRGESADTSSEETRLEYITHL
TRYDPREYLLLDAVALESLELFEPRAVQGREDATLVDVLDETACALGGRRLRDWIRRPLL
EPRRIDARLDAVEELQSDVQTRESLHDDLRAVYDLERLIGRISRERANARDLRSLHDTLA
VVPDVRENLADADCERLLDLHERLDPLADVRELIDGGIVSDPPIEITEGGIIADGYDEHL
DELRSTARDGKQWIDDLEDRERERTGIDSLKVGYNSVHGYYIEVTNPNLESVPENYERRQ
TLKNSERFVTPELKEREDQIVGAEERADEHEYELFREIRRRIADEVERVQDLADALATLD
ALVSLADVAAQYDYCRPELLEHETGDDGSGLEIEIDGGRHPVVERTQESFVPNDAQLTPE
QRLAIITGPNMSGKSTYMRQVAQIVLLAQVGSFVPATAARLTPVDRIFTRVGASDDIAGG
RSTFMVEMDELATILEEADERSLVLLDEVGRGTSTADGLAIAQAITEHLHDDVGATTLFA
THHHPLTELADDLESAFALHFEVERCDDDVVFHHDIAPGAATGSYGVAVATVAGVPDEVV
ERSRELVVDAAERDSGVSLEGGDGGERDDPTSAVASADGGESPVESRPSLGDEADADEVP
ADVADELRALDLAHLTPVEALTELDRLKRLLEE
NT seq 2802 nt   +upstreamnt  +downstreamnt
atggatccggcgcttggcccgcccgaaaagatggccgagaaacgcgacgagttgacgccg
atgatgcgtcagtaccacgatctctgcgcccgctacgacgacgcgctcgtgctctttcag
gtcggcgacttctacgaggcattttgtggggccgccgagcgaaccgcccgcctcctcgaa
atcgcccttaccagccgggaggacagtaccggcgagtacccgatggcgggcattccgatc
gacaacgccgagtcgtacatcgagacgttactcgaggccggctaccgagtcgccgtcgcc
gatcaggtcgaagaaccgggtgagtcaccgggggtcgtcgaacgggccgtgacgcgagtc
atcacgccgggaacgctcaccgaggacgaactcctcgccagcgacgacaacaatttcgtc
gccgctctcgccggcgacccacactcgagcggacagaccgaggacgaactcgcgctcgcc
ctgctcgacgtctcgacgggcgactttctcgcgacgagttcgagcgcgaacgagaccatc
gccgacgaagtgagtcggttcgatccgtcggaagccatcgtcgggcccaacgcaccgacg
gatctgcttcccgagacgtgcatggtgacgccgttcgacccgaacaccttcgaacgcgag
cgcgcagaagacaccctctcgcagtacgtccgtaatcccgacgcgctcctggcgagtgcg
gtcgaaatcagcgtctgcggcgcgttgctcgcgtacgcggagtacgtccgcggcggcgct
cacgagggcgaacgcggcgaggacgagcgaagtggcggcgacgatggcgacggagccaac
cgaggagagtccgccgacaccagttccgaagaaacccgtctcgagtacatcacccacctc
acgcgctacgacccgagggagtacctgctgctcgacgccgtcgcgctcgagagtctggag
ttgttcgagccgcgagccgtgcagggtcgcgaagacgcgacgctcgtcgacgtgctcgac
gagacggcctgtgcactcggcggccggcggcttcgcgactggatccgtcgcccgctgctc
gagccccgacggatcgacgcccgactcgacgccgtcgaggagttacaatcggacgtccag
acgagagaatcgctacacgacgacctccgggccgtctacgacctcgagcgactgatcgga
cgcatctcgcgcgaacgagcgaacgcgcgcgacttgcgttcgttgcacgacacgctagcc
gtcgtccccgacgttcgcgagaacctggccgacgccgactgcgagcgcctgctggacctt
cacgagcgtctcgatcctctggccgacgtgcgcgagttgatcgacggcggtatcgtctcg
gacccgccgatcgagatcacggagggcggaattatcgccgacggttacgacgagcactta
gacgagttgcgatcgaccgcccgcgacggcaaacagtggatcgacgacctcgaggaccgc
gagcgcgaacggacgggaatcgactcgttgaaagtcggctacaactcggttcacggctac
tacatcgaggtgacgaacccgaacctcgagtcggtgcccgagaactacgagcgccgacag
accctcaaaaactcggagcgattcgtcaccccggaactcaaagaacgagaggaccagatc
gtcggggcagaagagcgcgccgacgagcacgagtacgaactcttccgtgagatccgccgg
aggatcgcggacgaagtcgaacgagtccaggacctcgcggacgccctcgcgacgctcgac
gcgctcgtctcgctggcggacgtcgccgcacagtacgattactgccgccccgaactactc
gagcacgagacgggcgacgatggttcgggcctcgagatcgagatcgacggcggtcgtcac
ccagtcgtcgagcgaacgcaggagtcgttcgtgccaaacgacgcgcaactgacgcccgag
cagcgactggccattatcacggggccgaacatgtcgggcaagtcgacgtacatgcgacag
gtcgcacagatcgtcttgctcgcacaggtcgggagcttcgttccggcgaccgccgcgcga
ctcactcccgtcgatcggatcttcactcgagtcggggcgagcgacgatatcgcgggcggt
cgctcgacgttcatggtcgagatggacgaactcgcgacgattctcgaggaggccgacgag
cgctcgctggtcttgctcgacgaggtcggtcggggaacctcgacggcggacggactcgcc
atcgcccaggcgatcaccgagcacctccacgacgacgtcggcgcgacgacgctcttcgcg
acccatcaccacccgctgacggaactcgccgacgacctcgagtcggcgtttgccctccac
ttcgaggtcgaacggtgcgacgacgacgtcgtctttcaccacgatatcgcgccgggtgcg
gcgaccggttcctacggcgtcgcggtcgccaccgttgcgggggttcccgacgaggtcgtc
gaacgctcgagagaactggttgtggacgcggccgaacgcgatagcggggttagtctcgag
ggtggcgacggaggtgagcgggacgatccaacctcggcagtcgcgagcgccgacgggggc
gagtcgcctgtcgagtcgcgaccctcgttaggtgacgaagcggacgccgacgaggtaccg
gccgacgtggccgacgaactccgggcgctcgatctcgcacacctcacgcccgtcgaagcg
ttaaccgaactcgatcgattgaaacggttactcgaggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system