KEGG   Hyphomicrobium denitrificans ATCC 51888: Hden_2359
Entry
Hden_2359         CDS       T01265                                 
Name
(GenBank) transcriptional regulator, Rrf2 family
  KO
K04487  cysteine desulfurase [EC:2.8.1.7]
Organism
hdn  Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn00730  Thiamine metabolism
hdn01100  Metabolic pathways
hdn01240  Biosynthesis of cofactors
hdn04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:hdn00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    Hden_2359
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    Hden_2359
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hdn03016]
    Hden_2359
   03029 Mitochondrial biogenesis [BR:hdn03029]
    Hden_2359
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hdn02048]
    Hden_2359
Enzymes [BR:hdn01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     Hden_2359
Transfer RNA biogenesis [BR:hdn03016]
 Eukaryotic type
  tRNA modification factors
   Thiolation factors
    Hden_2359
 Prokaryotic type
    Hden_2359
Mitochondrial biogenesis [BR:hdn03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    Hden_2359
Prokaryotic defense system [BR:hdn02048]
 DNA phosphothiolation system
  Sulfur modification proteins
   Hden_2359
SSDB
Motif
Pfam: Aminotran_5 Rrf2 Beta_elim_lyase
Other DBs
NCBI-ProteinID: ADJ24156
UniProt: D8JRT8
Position
complement(2416504..2418075)
AA seq 523 aa
MELTTKGRYAVMAMADLAAHADRTAVPLSSVAERQHLPLSYLEQLFVPLRRSGLVESARG
RAGGYRLSKKPEEISIAAVMAAVEEVTHFTRCTDNDPRCSVGTPCLTHGLWSALSRATSE
FLESVSLADVLPGGEFAVKAAATATESPAPPMRAYLDYNATAPLCSEAKVAMIEALDVVG
NPSSVHMEGRRARGVVESARESVARLVGAKPSEVVFTSGASEANAWVMAQPWQTILTNGI
EHDSVLAPARAAKCNVLELATGRNGIVCVEQIAEYVLKHGVPRPAVIALQMANNETGVIQ
PVGEVAEFARAHGILMHSDAVQAAGRVPVDFASLGLDTMAISAHKLGGPKGIGALIIRDH
LDLVPMLRGGGQERRRRAGTENVAAIAGFGAAAEAAHAELRSMAAIESLRDDLEAHIRAI
SPRAEIIGEASPRIGNTIAVALPGKLAETLVIRLDLAGVAVSAGSACSSGKVGASHVLEA
MGLGPEIASGTIRISLGRETTKDDIAAFVAAWQAIAGSQAIAA
NT seq 1572 nt   +upstreamnt  +downstreamnt
gtggaactgacgaccaaaggccggtacgcggtcatggcgatggcagatctcgctgcccac
gccgatcgaactgctgttccgctttcgtcagtggcggaacgccagcatctcccgctttcc
tatctcgaacagcttttcgtcccgcttcgccgatccggtctggttgaaagcgcgcgcgga
cgcgccggcggctatcgcctctcgaagaagcccgaagaaatttccattgcggccgtgatg
gccgccgtcgaggaagtcacgcacttcacgcgctgcaccgacaacgatccgcgctgctcg
gttgggacgccctgcctgacgcacggtttgtggagcgcgctgagcagggcaacgtcggag
tttctggaatccgtcagtctcgccgacgttttgccgggcggagaattcgccgtgaaagcg
gcggcgaccgccacggagtcgcctgcgcccccgatgcgcgcgtatctcgactacaacgcg
accgcgccgctgtgctcggaagcgaaggtggcgatgatcgaagcactcgacgtcgttgga
aatccgtcctctgttcacatggaaggccgtcgcgcgagaggcgtcgtggaatcggcgcgc
gagagcgttgcccgtctcgtcggcgcgaagccgtccgaagtcgttttcaccagcggcgca
tcggaggcgaacgcctgggtcatggcgcagccgtggcaaacgatcctgacgaacggcatc
gagcacgactcggttcttgctccggcgcgcgcggcaaagtgcaacgtccttgaacttgcg
accggccgcaacggcattgtgtgcgtcgaacagatcgctgagtacgtattgaagcatggc
gtgcctcgtccggccgtcatcgcgctgcaaatggcgaacaacgaaaccggcgtcattcag
ccggtcggtgaagtcgccgaattcgcgcgcgcgcatggcattctcatgcattccgatgcg
gtgcaggcggcaggccgcgtgccggtggactttgcctccctcgggctcgatacgatggcg
atctcggcgcacaagcttggcggcccgaaaggcattggcgctttgatcattcgtgaccat
cttgatctcgtgccgatgctgcgcggtggaggccaggaacgccgccgtcgcgctgggacg
gagaacgtcgcggcgatcgctggctttggcgccgcggccgaagccgcgcatgctgaactt
cgcagcatggcggcgattgaatcattgcgcgacgatctcgaagcgcacattcgtgcgatc
agcccgcgcgccgagattatcggagaagcgtcgccgcgcatcggcaacaccatcgcggtc
gcgctgccgggaaagctggcggagaccttggtgatccgcctcgatctggcaggcgtcgca
gtcagcgcgggctcggcctgttcgtctggcaaagtcggcgccagccatgtgctcgaagcg
atgggactcggccccgaaatcgcgtccggaacgatccgcatcagtcttgggcgcgaaacg
acgaaagacgacatcgcggcgtttgtcgcggcctggcaagcgattgccggctcgcaggca
atcgccgcttga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (42)   

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