KEGG   Hyphomicrobium denitrificans ATCC 51888: Hden_3289
Entry
Hden_3289         CDS       T01265                                 
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
hdn  Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn03030  DNA replication
hdn03430  Mismatch repair
hdn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Hden_3289
   03430 Mismatch repair
    Hden_3289
   03440 Homologous recombination
    Hden_3289
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hdn03032]
    Hden_3289
   03400 DNA repair and recombination proteins [BR:hdn03400]
    Hden_3289
Enzymes [BR:hdn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Hden_3289
DNA replication proteins [BR:hdn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Hden_3289
DNA repair and recombination proteins [BR:hdn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Hden_3289
SSDB
Motif
Pfam: DNA_pol3_delta
Other DBs
NCBI-ProteinID: ADJ25082
UniProt: D8JWX4
Position
complement(3362855..3363898)
AA seq 347 aa
MVAIKAHQAESFMKSPPAQLAAALFFGSDPGLVSERSTVLARTLAARENPPGEILRLDDS
ELDEDTGRLETELQMRPMFASRRIVRAIAGRRISAQLLKPILSSPFEGLLIVEAGNLKTD
DTLRALFEKTENCFAVACYPDAAADIDGLIAEVLSSFSLSIEGDARALLQSRLGADRALS
RAEIEKLALHSLGKQMITLEDVENVVGDAADLALERIAEAAAEGRTATAMTDFGRALAAG
ESAQAIILVTQRYFLKLHKVRSDVDAGQRLDDALKAVRPPIFFKQRDAFARQIRNWPRPQ
LDQALRRIAETAKSARLSSRYEDLYAERLLLALASMAAAGLAASPRR
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggtcgccatcaaggctcatcaggccgagtcgttcatgaagtcgccgccggcgcaattg
gcggcggcactgttcttcggctccgatccgggacttgtcagcgagcgttcgacggtgctg
gcgcgcaccctcgcggcgcgcgaaaacccgcccggcgaaattctgcggctcgatgactcc
gaactcgacgaagatacgggccgcctcgaaaccgagctgcaaatgcgcccgatgttcgcc
tcgcgccgcatcgttcgcgccatcgccggacgccgcatctccgcacagcttctgaagcca
attctctcgtccccattcgagggcctgctgatcgttgaagccggcaacctcaaaaccgac
gacaccctgcgcgcgctgttcgagaagaccgaaaactgcttcgccgtcgcctgctatccc
gacgctgccgccgacatcgacggcctcatcgcggaagtgctctcgtcattctcgctgtcg
atcgaaggtgacgcgcgagcgctattgcagtcccgcctcggcgccgaccgggcgctctcg
cgcgccgagatcgaaaaacttgcgctgcacagcctcggcaagcagatgattacgctcgaa
gacgtcgaaaacgtcgtcggcgacgcggccgacctcgcgctcgaacgtatcgccgaggct
gccgccgaaggccggactgcaaccgctatgaccgacttcggccgcgcgctggcggctggc
gaaagcgcacaggcgatcattctcgtgacccagcgctacttcctgaaactccacaaggtt
cgcagcgacgtcgatgccggccaacgcctcgacgacgcgctcaaagctgtgcggccgccg
atcttcttcaagcagcgcgatgcctttgcgcgccagatccgcaactggccgaggccgcag
ctcgaccaggcgctgcgccggattgccgaaacggccaagtccgcgcgtctttcgagccgg
tacgaagatctttacgccgaacgcctgcttctggccctcgcctcaatggccgccgccggc
cttgccgcgtctcctcgccgctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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