KEGG   Helicobacter pylori F16: HPF16_1165
Entry
HPF16_1165        CDS       T01910                                 
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
hef  Helicobacter pylori F16
Pathway
hef03030  DNA replication
hef03430  Mismatch repair
hef03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPF16_1165 (holB)
   03430 Mismatch repair
    HPF16_1165 (holB)
   03440 Homologous recombination
    HPF16_1165 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hef03032]
    HPF16_1165 (holB)
   03400 DNA repair and recombination proteins [BR:hef03400]
    HPF16_1165 (holB)
Enzymes [BR:hef01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HPF16_1165 (holB)
DNA replication proteins [BR:hef03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HPF16_1165 (holB)
DNA repair and recombination proteins [BR:hef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HPF16_1165 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 IMD CRR7
Other DBs
NCBI-ProteinID: BAJ55762
Position
1240169..1240825
AA seq 218 aa
MKNSNRLIYTDNLEESLEEVASLFKHHIKFYTEIIEKDKKVIKTFNKDFKIEHAKEVISK
AHLKHSEPNAFLIAAPSYGIEAQNALLKILEEPPNNVCFIMFAKSPNHVLATIKSRLIKE
DKRQKIPLKPLDLDLSKLDLKDIYAFLKNLDKENFDSRENQREKIESLLESVNRHKIPLN
EQELQAFDLAIKANSSYYKLSYNLLPLLLSLLSKKKTP
NT seq 657 nt   +upstreamnt  +downstreamnt
gtgaaaaactccaaccgccttatttatacggacaatcttgaagagagcctagaagaggtt
gcaagccttttcaagcaccacattaaattctacaccgagatcattgaaaaagacaaaaag
gtgatcaaaacttttaacaaggattttaaaatagagcatgccaaagaagttatttcaaag
gctcacttaaaacacagcgaaccaaacgcctttttaatcgctgcgcccagttatggcata
gaagcccaaaacgcgcttttaaaaattttagaagaacccccaaataatgtttgttttatc
atgtttgctaaaagcccaaaccatgttttagccaccattaaatcccgcttaatcaaagaa
gacaagcgccaaaaaatccccctaaaacctttagatttggatttatcaaagctagatttg
aaagatatttatgcgtttttaaaaaatttagacaaagaaaattttgattccagagaaaat
cagagggaaaaaattgaaagcctgttagagagcgttaataggcataagatcccattaaac
gagcaagaattgcaagcctttgatttagcgatcaaggctaacagctcttattacaagctc
agctacaatcttttacccctacttttaagccttttatctaaaaagaaaacgccatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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