KEGG   Helicobacter pylori Gambia94/24: HPGAM_04945
Entry
HPGAM_04945       CDS       T01917                                 
Name
(GenBank) hypothetical protein
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
heg  Helicobacter pylori Gambia94/24
Brite
KEGG Orthology (KO) [BR:heg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:heg03009]
    HPGAM_04945
Enzymes [BR:heg01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     HPGAM_04945
Ribosome biogenesis [BR:heg03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HPGAM_04945
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ADU81803
Position
complement(1002777..1003505)
AA seq 242 aa
MEKAYKILSVQENISHKKAKALIDLGLVSIGGKKLSIARKELPQNTRFSVQKVEKPSVIF
EDENILALFKPPFIESYDLVSFFKDWALLHRLDKETSGVILLVKENSEFHLKAKKAFKDR
AVRKEYLALVQGIVEEEREINAPILTIKTTKAFSKISKKGQEAITIITPLKIINKKTLLK
VGIKTGRTHQIRVHLKHINHPIIGDTLYNNEPSSAKRLMLHAHKIALLGYEFEAIAPKEF
EI
NT seq 729 nt   +upstreamnt  +downstreamnt
atggaaaaagcttataaaatattgagcgttcaagaaaacatttcgcataaaaaagccaaa
gctttgattgatttggggttagtgagcataggggggaaaaaattgagcatcgccagaaag
gaattgccccaaaacacgcgctttagcgtccaaaaggttgaaaaacccagcgtgattttt
gaagatgaaaacattctagccctttttaaacccccctttatagagagctatgatctagtt
tcttttttcaaagattgggcgttgttgcaccgcttggataaagaaacaagcggggtgatt
ttattggtgaaagaaaattcagaattccacttaaaagctaaaaaggcttttaaagacagg
gcggttagaaaagagtatttagcactcgttcaaggcatcgtagaagaagagcgagaaatc
aacgcccccattcttaccattaaaaccactaaagctttcagcaaaatttctaaaaaaggg
caagaagcgatcacgatcatcacgcccttaaaaatcatcaacaaaaaaacccttttaaaa
gtggggatcaaaaccggaagaacccatcagatcagagtccatttaaagcatatcaaccac
cccattataggcgatacgctttataataacgagccaagttccgccaaacgcttgatgctc
catgcgcataaaatcgcgctgttagggtatgaatttgaagcgatcgctcctaaagaattt
gaaatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system