KEGG   Haloferax gibbonsii: ABY42_08445
Entry
ABY42_08445       CDS       T04025                                 
Name
(GenBank) transcription factor
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hgi  Haloferax gibbonsii
Pathway
hgi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    ABY42_08445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hgi03000]
    ABY42_08445
   03021 Transcription machinery [BR:hgi03021]
    ABY42_08445
Transcription factors [BR:hgi03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    ABY42_08445
Transcription machinery [BR:hgi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     ABY42_08445
  RNA polymerase III system
    TFIIIB
     ABY42_08445
  RNA polymerase I system
    SL1/TIF-1B
     ABY42_08445
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-ProteinID: AKU07777
UniProt: A0A0K1ITB7
Position
complement(1617075..1617635)
AA seq 186 aa
MSGPADSIEIQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFR
SGKIVCTGAKSIDDVHDALGIIFDKLRELKIPVDDEPEITVQNIVSSADLGHNLNLNALA
IGLGLEDVEYEPEQFPGLVYRMDEPKVVILLFGSGKIVITGGKRTDDAETAVEEIVERID
ALGLLG
NT seq 561 nt   +upstreamnt  +downstreamnt
atgagtgggccggcagactccatcgagattcagaacgtagtcgcatcgaccgggatcggt
caggagctcgacctcgaagccctcgccgacgacctccccggtgcagatttcaacccggac
aacttcccgggcctcgtctatcgcacccaggacccgaaagccgctgcgctcatcttccgc
tcggggaagatcgtgtgcacgggcgcaaagagtatcgacgacgtgcacgacgcactcgga
atcatcttcgacaagctccgcgagctgaagattcccgtcgatgacgagccagagataacc
gtccagaacatcgtctccagcgcggacctcggacacaacttgaacctgaacgcgctggct
atcggactcggtctcgaagacgtcgagtacgagcccgagcagttccccggcctcgtctat
cggatggacgagccgaaggttgtcatcctgcttttcggttccgggaaaatcgtcattacc
ggcggaaagcggaccgacgacgcggagaccgcggtcgaagagatcgtcgagcgcatcgac
gcgctcggactgctcggatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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