KEGG   Heterocephalus glaber (naked mole-rat): 101710460
Entry
101710460         CDS       T02812                                 
Symbol
Mex3b
Name
(RefSeq) mex-3 RNA binding family member B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hgl03019]
    101710460 (Mex3b)
   04121 Ubiquitin system [BR:hgl04121]
    101710460 (Mex3b)
Enzymes [BR:hgl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101710460 (Mex3b)
Messenger RNA biogenesis [BR:hgl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101710460 (Mex3b)
Ubiquitin system [BR:hgl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101710460 (Mex3b)
SSDB
Motif
Pfam: KH_1 zf-C3HC4_3 zf-C3HC4 KH_2 Prok-RING_4 zf-RING_UBOX zf-RING_5 zf-P11
Other DBs
NCBI-GeneID: 101710460
NCBI-ProteinID: XP_004852935
Position
Un
AA seq 571 aa
MPSSLFADLERNGGGGGGGGGGGGGGGGGETLDDQRALQLALDQLSLLGLDSDEGASLYD
SEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGR
KEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVV
GPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGIVELT
DENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSAS
TDSYFGGGTSGSAAATPRLADYSPPSPALSFSHNGNNNNNGNGYTYPAGDAPAQSPEGCS
ELQPTFDPAPAPPPGAPLLWAQFERSPGGGSAAPVSSSCSSASSSASSSSVVFPGGGAGG
PSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGL
GAQLPGLQSSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLF
CMECANRICEKSEPECPVCHAAVTQAIRIFS
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgcccagctcgctgttcgcagacctggagcgcaacggcggcgggggaggcggcggcggc
ggcggcggtggcggcggcggcggcggcgagaccctggacgaccagcgagccctgcagctt
gctctcgaccagctctctctgctgggtctggacagcgacgagggcgcgtctctgtacgac
agcgagccgcgaaagaagagcgtgaacatgaccgagtgcgtgccggtgcccagctcggag
cacgtcgcggagatcgtagggaggcaaggttgtaaaatcaaagcgctgcgggcgaagacc
aacacttacatcaagaccccagtgcgcggggaggagcctgtctttgttgtgacgggcagg
aaggaagatgtggccatggctcggagggaaatcatctctgcggcggagcacttctccatg
atccgagcctcgcggaataaaaacacggcgctcaacggcgcagtgcccgggccaccaaac
ctgccggggcagaccaccatccaggtgcgggtgccctaccgcgtggtggggctcgtggtg
gggcccaaaggcgccacgatcaagcgcatccagcagcagacgcacacatacatcgtgacg
cccagccgcgacaaggagccagtgttcgaggtgacaggtatgccggagaatgtggaccgc
gcgcgggaggagatagaggcgcacatcgctctgcgcaccggtggcatcgtcgagcttacc
gacgagaacgatttccacgccaacggcaccgacgtgggcttcgacctgcaccacgggtcc
ggcgggtccggcccgggcagcctctggagcaagcccactcccagcatcacgcccaccccc
ggccgcaagcccttctccagctaccgcaacgacagctccagttcgcttggcagcgcctcc
acagactcttactttggcggggggaccagcggcagcgcggctgccaccccacgcctggcg
gactacagcccccccagccccgcgctcagcttctcgcacaacgggaacaacaacaacaac
ggcaatgggtacacgtatccggccggggacgccccggcgcagtctcccgagggctgctcg
gagctgcagcccaccttcgatccggcgcccgcgccccctcctggcgcgccccttctctgg
gcgcaattcgagcggtccccgggaggcggctccgcggcccccgtatcctcctcctgctcc
tccgcgtcctcgtccgcctcgtcgtcctctgtggtcttccccgggggtggcgccggcggg
ccttccaacgccaacctgggtctcctggtgcaccgaaggctgcacccggggaccagctgc
ccgcgcctgtccccgcccttgcacatggccccgggggcgggcgagcaccacctggctcgc
cgggtgcgcagcgacccaggtggaggtggtctggcctatgctgcctatgccaacgggctg
ggggcgcagctgcccggtctgcagtcctcggacacgtcggggtcctcttcgtcctccagc
tcgtcctccagctcttcctcttcttcctcggggctgcggcggaagggcagccgcgactgc
tccgtgtgcttcgagagcgaagtgatcgctgcgctggtaccctgcggccacaacctcttc
tgcatggagtgcgccaaccgcatctgcgagaagagcgagcccgagtgcccagtctgccac
gccgcggtcacgcaggccatccgcatcttctcctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (36)   

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