KEGG   Halorhodospira halophila: Hhal_0028
Entry
Hhal_0028         CDS       T00462                                 
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
hha  Halorhodospira halophila
Brite
KEGG Orthology (KO) [BR:hha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hha03009]
    Hhal_0028
Enzymes [BR:hha01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Hhal_0028
Ribosome biogenesis [BR:hha03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Hhal_0028
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 MTS Cons_hypoth95 Methyltransf_11 Methyltransf_23 TRAM Met_10 Methyltransf_12 RrnaAD Methyltransf_15 PCMT PrmA Methyltr_RsmB-F UPF0020 Methyltransf_32 DNA_methylase CMAS
Other DBs
NCBI-ProteinID: ABM60823
UniProt: A1WT11
Position
complement(30558..31862)
AA seq 434 aa
MSREPVEARIEGMAHEGRGITHDDQGRPVFVDFALPGERIRYRYTKLRRQRAEATAIEIL
EPAAERIAPGCEHFGNCGGCALQHLPAEAQIAHKERVLAEQLQRIGGVEPEQWLAPLTGP
AWGYRRKARLAVKHVPKKGGVLVGFREKHSPLVAPVEYCPVLDPRVGERMQGLAELVGSL
SIPDRIPQIEVACGDKHAALVFRHLAPLTEDDLDRLSDFAEATGLTILRQPGDESTVTPV
APQPAPQLSYALSPYGVEVAFLPTDFTQVNASINMAMVERALEWLQPQSGRRILDLFCGV
GNFTLPLAREGATVTGIEGDPRLVERAEENAAANGLHADFAVADLATEEGTRRVAGGFDA
VLLDPPRSGAQEVLSAVAGTGARRVVYCSCGPATLARDAGILVAEHGFRLNAAGIMDMFP
HTAHVESFAVFDRD
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgtctcgcgagccggtggaggcccgtatcgagggcatggcccacgaggggcgggggatc
acccacgacgatcagggtcgcccggtctttgtcgatttcgccttgcccggcgagcggatc
cgctaccggtataccaagctgcgccgtcagcgggccgaggcgacggccatcgagattctg
gagccagcagccgagcggatcgcgccgggttgcgaacatttcggcaactgcggggggtgt
gcgctccaacacctgcccgctgaggcgcagatcgcccacaaggagcgcgtcctggccgaa
cagctgcagcgtatcggcggcgtcgagccggagcagtggctggcaccgttgactggtccc
gcgtgggggtatcggcgcaaggcacggctcgccgtcaagcatgtgcccaaaaagggcggg
gtgctggtcggcttccgcgagaagcacagcccgctggtcgccccggtggagtactgtccg
gtcctcgacccgcgtgtgggcgagcggatgcaggggctggccgagctggtcggttcgctc
tccatccccgaccgcatcccgcagatcgaggtagcctgcggcgacaagcacgcggcgctg
gtgttccgccacctggcgccgttgaccgaggatgatctggatcggctgagcgatttcgcc
gaggccaccggcctgacgatcctccggcaaccgggggatgaatcgacggtgacccccgtg
gcaccgcaaccggccccgcagctaagctatgcactgtcgccctacggggtcgaggtggcg
ttcctgcccacggatttcacccaggtgaacgcctccatcaacatggccatggtcgagcgc
gccctggaatggctgcagccgcagtcgggtcgtcgcatactcgacctgttctgtggcgtg
ggtaatttcaccctgccactggcacgggagggcgcgacggtcaccggcattgagggcgac
ccacgactcgtcgagcgagcggaggagaatgccgcggccaacggtctgcacgccgatttc
gctgtggcggatctggccaccgaggagggaacccggcgcgtggcgggggggttcgatgcc
gtgctcctcgacccgccacgctccggtgcccaggaggtactctccgcggttgccggcacc
ggggcccggcgggtggtctactgctcctgtggcccggcaacgctggcccgcgatgcgggg
attctcgtcgccgagcacggcttccgcctgaatgctgcgggtatcatggacatgttcccg
cataccgcccatgtggagagcttcgcggtctttgaccgcgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (42)   

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