KEGG   Halobacterium hubeiense: Hhub_5064
Entry
Hhub_5064         CDS       T04202                                 
Symbol
tfbA9
Name
(GenBank) transcription initiation factor TFB
  KO
K03124  transcription initiation factor TFIIB
Organism
hhb  Halobacterium hubeiense
Pathway
hhb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hhb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Hhub_5064 (tfbA9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hhb03021]
    Hhub_5064 (tfbA9)
Transcription machinery [BR:hhb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Hhub_5064 (tfbA9)
 Prokaryotic type
  Archaeal type
    TFB
     Hhub_5064 (tfbA9)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon RB_B DZR_2 DZR OrfB_Zn_ribbon UPF0547
Other DBs
NCBI-ProteinID: CQH64539
UniProt: A0A0U5H944
Position
pSTJ002:54964..55941
AA seq 325 aa
MGEGLAVLAGSRNTVRTMATRDIYESGFDEDVRTESSANQCPECDGRVTTNAVETVCEDC
GLVIDEQRIDHGPEWRAYDDEERERTGAPLTAARHDRGLSTEIGRGTDAKGNEISGQKRR
RLARMRREQTRGRWRSKAERNLAHGLGEVRRLASALELSDSVRDQACQLFRSAQNEDLLR
GRSIEAIAAASVYGACRCNGLSRLVDDVSEMARVAESRVTNAYKTLNEELGLPAEPVSPS
MFVPRLASDLECPDEIRQRARTLAEQAEERGVTTGVHPAGFAAACLYKAGRKEGRWLTQS
EAADVANASKATVRAHRDTLEEQVA
NT seq 978 nt   +upstreamnt  +downstreamnt
atgggtgagggactcgctgtactggcgggttcccgaaacacggtgagaacgatggcaact
agagacatctacgagagcggattcgacgaggacgtccgaacggaatcgagtgcgaaccag
tgtcccgagtgcgacggtcgagtcaccacgaacgcggtcgaaacggtctgcgaggactgt
ggcctggtcatcgacgaacagcgcatcgatcacgggccggagtggcgggcgtacgacgac
gaggagcgcgagcgaacgggcgctccactcactgcggcccgccacgatcgcggcctgtcg
acggagatcggtcgcggcaccgacgcgaaggggaacgagatctctgggcagaagcgacgg
cgactcgcacggatgcgccgtgaacagacccgagggcgctggcggtcgaaagcggaacgg
aatctcgcacacgggttgggcgaggtgcgtcggttggcgagtgcgctcgaactctctgat
tcggtccgcgaccaagcgtgtcagctcttccggagcgcccagaacgaggatctgcttcgt
ggcaggtccatcgaggccatcgccgcggccagcgtctacggggcctgccggtgcaacggc
ctctcgcggttggtggatgacgtcagcgagatggcccgcgtcgcggagtcacgggttacg
aacgcgtacaaaacgttgaacgaggagctgggcctccccgctgagcccgtctcccccagc
atgttcgtgccgcgcctcgcctcggacctcgagtgtccggacgagatccgacagcgggcc
cgaacgctcgcggagcaggccgaggagcgcggcgtcacgacgggcgtccatccggccggg
ttcgcagcggcctgcctctacaaggccggtcgcaaggaggggcgatggctgacgcaatcc
gaggccgcggacgtggcgaacgcctcgaaggcgactgttcgggcacaccgagatacctta
gaggagcaggtggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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