KEGG   Halobacterium hubeiense: Hhub_5159
Entry
Hhub_5159         CDS       T04202                                 
Name
(GenBank) homolog to nuclease subunit B
  KO
K16899  ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
Organism
hhb  Halobacterium hubeiense
Brite
KEGG Orthology (KO) [BR:hhb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhb03400]
    Hhub_5159
Enzymes [BR:hhb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Hhub_5159
DNA repair and recombination proteins [BR:hhb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     Hhub_5159
SSDB
Motif
Pfam: PDDEXK_1
Other DBs
NCBI-ProteinID: CQH64713
UniProt: A0A0U5H596
Position
pSTJ002:130014..133202
AA seq 1062 aa
MDSTLLTGPKHARLERRAFQRADDIAINSLGSILYITRNDARRSMVEDSWAVSHEPLRLR
AETLDAVVREWYEHLHGPVQPLSGQLNRRLAEYALDRTTAETDGALAGEPASAALADSFS
SRFSLFDDAGVGTADALAAEFEGSDLDDHIATATVDAYRHYRDLHADFVDEWVCTRGEMF
DAVATAEQSLSALSPELDVVILSGYHEFRPVERRLIERLADELPMIALLPLHQDGRSGVD
AVAEDALDVYEALDFETVELEPVDESGQAFGTITEALYRPDPDTVPSPDTLRWRERPTPE
REIRFVARELRTELANGRDPDDLAVVVPGTEAYSGYVEDTFDTFDIPHVTTDASQLNRTF
TGSVVHDLLNLAEPDPRAEDLTSLFANPLVNVVDTDQANAVTAAARRRGTVSVSPLLDDV
DDEAAELIENLLATLETLRTGDVEGATKTLRRLLDERFDLEGATEDYASGAEQAVEQRAY
DLVDEVLSSFESLAAVNSDLSPLALFTRAFDGVPIRVPQRAAGGHVEVMGLLDARMRSFE
KVFLVGLTSEHFPVTPERPAFFEEMTDAHPRFDTGDERLRGRYLFATLLANVDELTITTP
ETGDDESAVVRSPVLDELQRVTGIEPEDGVDDRVGSREDLQRHVAATADRRAAVSRAGDR
GDLSPEQTKRTDRGLHCAANRGTAGLSDHDGVLDPETVDEVYPPSEREPYSASRIERYVE
CGFKFYADEVLEIEDPDDVEVVPTPLETGSYVHDVLERFFADLQDETEDGVDLTEFDRND
LAIHLREIAVEELRDADFEYDGLFYERWKAELFAGLGDGESAPYEAGSKPHDAPEQGLFA
TFLDNELSRDGADRPHLFEAPFGEGLPDSDAGPFTVERPDGSTVSIRGYIDRVDVSQGGE
QPTLTLYDYKTGRAPYMTKTTGGTKFQLPIYLLAAANVVDGDLFEQGSLSATYYQVRPPN
DLKVPRGVESKFDSEAELRRFLNDVVPEWLGQIDEAIGNGRFHTTLLSARGANCRYCDYR
RACDVRHHRKREFVDEVNEDDAAYVPLRVRDDEDIETVMSDD
NT seq 3189 nt   +upstreamnt  +downstreamnt
atggattcaacgcttctgaccggtccgaaacacgcccgattggaacgacgggcatttcag
cgggctgatgatatcgcaattaattcgctggggagtattctctacataacgcggaacgac
gctcgccggagtatggttgaggacagctgggccgtttcccacgaacctctccgtcttcgt
gcggagacgcttgacgcggtcgttcgggagtggtacgagcatctccacggtccggttcaa
ccgctctccgggcagctgaaccgtcggctcgcggagtacgcgcttgaccgaacaacagcc
gagacagatggcgctcttgctggcgaaccagcctctgccgccctcgctgattcgttcagc
agtcgcttctcactcttcgacgacgccggcgtcggtaccgctgacgcactggcggcggag
ttcgagggctcagacctcgatgaccatatcgcgacagccactgtcgacgcgtaccgacac
taccgggatctccatgccgactttgtcgatgagtgggtctgtacccggggagaaatgttc
gacgccgtcgcaacggcggagcagtcactatcggcgctctccccggaactggatgtcgtc
atcctttccgggtatcacgagttccgccccgtcgaacgccgcctcatcgaacgcctcgcc
gacgagcttccgatgatcgcactgctgccactccaccaggatggccggagcggagtcgac
gccgttgcggaggacgccttggatgtgtacgaagcacttgactttgagacagtagaactc
gagcccgtcgacgagtcagggcaggcctttggaacgatcaccgaggcgctctaccgcccg
gaccccgacaccgtcccttctccagacactctgcgatggcgtgaacgcccgacgcccgag
cgcgagattcgcttcgtcgctcgcgagctccggactgagttggccaatggtcgcgacccc
gacgacctggccgtcgtcgttcccgggactgaggcttattcggggtacgtcgaggatacg
ttcgatacgttcgatatcccgcacgtcacgaccgacgcctcacagctgaaccggacgttc
accgggagcgtcgtccacgacctcctgaacctcgccgaaccggatccgcgggctgaggac
ctcacgtccctgtttgcgaatccactagtcaatgtcgtcgacaccgaccaagccaacgcc
gtcacggcagctgctcgccggcgtggcaccgtttctgtgtcacccctgctcgatgacgtc
gacgacgaggcggcggaactgatcgagaacctactggccacgctagagacgctccgaaca
ggcgacgtcgagggcgcaaccaagactctccgacgactgttggacgaacggttcgacctg
gagggggcgacggaggactacgccagcggcgccgagcaagccgtcgaacagcgagcctac
gacctcgtagacgaggtcctctcctcgttcgagtcgctggcggcggtcaatagcgatctc
tccccgttggcactgttcactcgtgcgttcgatggtgttccgatccgggttccgcagcgc
gctgctggcggtcacgtcgaagtgatggggttgctcgacgcccggatgcgctcgttcgag
aaggtgtttctcgtggggctgacgagcgagcacttccccgtgacgccggagcgcccggcc
ttcttcgaagaaatgaccgacgcccatccacggttcgacactggcgacgagcgcctccgg
gggcgctatctcttcgcgacgctcctggcgaacgttgacgaactcacgatcaccacacca
gagacgggcgacgacgaatccgccgtcgtccggtcgccggtcctcgacgaactccagcgc
gtgaccggcatcgaacccgaagatggcgtcgacgaccgcgtgggctcccgcgaagacctc
cagcggcacgtcgctgcaacggccgaccggcgtgcggcagtcagccgcgccggcgaccga
ggtgacctctcccccgagcagaccaagcgcacggatcggggactccactgtgcggccaac
aggggaacggctggcctctccgaccacgacggcgtgttggatcccgagacagtcgatgag
gtataccctccgtcggagcgagaaccctacagcgcgagtcggatcgagcgatacgtcgag
tgtgggttcaagttctacgccgacgaagtgctcgaaatcgaggatcccgacgacgtcgag
gtcgtccctacgcccctcgaaaccggatcgtacgtccacgacgtcctcgaacggttcttc
gcggatctacaggacgaaaccgaagatggtgtcgacctcaccgagttcgaccggaacgac
ttggcgatacaccttcgcgagattgccgtcgaagaactccgggatgctgacttcgagtac
gacggcctgttctatgaacggtggaaggcggagctgttcgcgggcctgggtgacggcgag
agtgctccgtacgaggccgggagcaaacctcacgacgcaccggaacaggggttgttcgct
accttcctcgacaacgaactctcgcgggacggcgctgaccgcccacacttgttcgaggcc
ccgttcggcgagggacttcccgactcggatgctgggccgttcacagttgagcgaccggac
ggctcgactgtctcgattcggggatacatcgaccgcgttgacgtgagccagggtggcgaa
caaccgacgctcacgctctacgactacaagactggtcgagcaccgtatatgacgaagaca
accggcggcacgaagttccaactccccatttatctgcttgctgcggccaacgtcgtcgac
ggtgatctgttcgagcagggatcgctttcagcgacgtactatcaggtgcgaccccccaac
gacctcaaggttccacgcggcgtcgaatcgaagttcgattcagaggccgaactccgccgg
ttcctgaacgatgttgttccggagtggctgggccaaatcgacgaggcgatcggcaacggt
cggttccacacgaccctcctgtcggcccgcggagcgaactgccgatactgtgactaccgt
cgggcgtgcgatgtccgccatcaccgcaagcgggagttcgtcgacgaggttaacgaggac
gacgctgcgtacgttccgctccgtgttcgcgacgacgaggacatcgagacggtgatgagc
gatgactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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