KEGG   Halobacterium hubeiense: Hhub_5160
Entry
Hhub_5160         CDS       T04202                                 
Name
(GenBank) UvrD/REP family helicase
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
hhb  Halobacterium hubeiense
Brite
KEGG Orthology (KO) [BR:hhb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhb03400]
    Hhub_5160
Enzymes [BR:hhb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Hhub_5160
DNA repair and recombination proteins [BR:hhb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     Hhub_5160
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30 AAA_16 DEAD
Other DBs
NCBI-ProteinID: CQH64715
UniProt: A0A0U5H7W7
Position
pSTJ002:133195..136833
AA seq 1212 aa
MTEEPEEIQLTEEQEDALVQGRNVAITAGAGTGKTTTLTERYVTILAENPSLTPENIVTI
TFTRKAAAELTERVREEVYDRLEAVDSPEAYHRWRNVLDDLEDGYVHTIHAFCTRLLRER
AVEAPVPLGFDVLDEDGAATLQREVVTEFLERNLDDDDVALLAQLWGRDQLVDVLTGLLD
ERPQSEAVLEEWRDAEVNDYVDICWEVVCDLDVADARQTLYADGLLEQLRTVAGRVDREG
AIADEDGLRAYRTFTEVATTLSADPEESDPRDCQRAILELYEACEKKNGGLYSSSGYVVG
DRDDWGEYGDVYDDLKDTIDTVIDAVEPHADAVETTPGELEANSAHYALALMRVFNDVLA
AYADEKERRDTLDFPDVIETTLEFLRANDVVTERLREQFAAVMVDEFQDTDPRQWELVKL
LTGVDEQTASNVFLVGDEKQSIYGFRGADVTTFGDARRELQTVNEARGVDDVPDSDGESP
TALELSGNFRTLDEPLSFLNELFEYLFQPEGDTHEPYEAPPQGLSTQRDRVEDIEGLTGS
VEYLAVPDDADTAAELFGDDHPVAEGALDHTIEAEAQALTARLTHLFDDPPQVQDPDTGA
HRDATPDDTAILLRRRTHLDRYQRALEKYDIPYTVVGGVGFYDTPEVQALTNLLRVLGDP
QDDVSLYGVLRSPLFGFADDRLAPAVAEANSVWDALAEADDPQLADAFDLLTTWRTLSGC
ATPSEDGVLPWNRLLSRVIDDTGYLASVSADERGRQAVANVEKFRDQVRTWSENGVHTAA
GLLHRIDRQAEIDPREGEADIPGDVEGVRIMTIHAAKGLEFPIVTVPDLGSDLNFGRSVD
DHGYVRLVKGTTDAPPIPAVGGPHPNDAFSIEKTAVHEYADRRSLPQERAESKRLLYVAC
TRTRDHLLLCGTHDIDIDESGHIELGEPDDFDDASRWRDWLQPILFDDQELVAEAVHEGA
TDARIGDASYTIQTPPRPVEWQSEAPSEEVDPAITVPSPPEQQAAVRVAATTLVSAVADA
YEDGHSYTTGDETIGLSPTTFGTVVHRLNELRPPRDEWPSFIRQLSRMGGEEPTDGDLQA
AVSHAQDAIRFVDETEADLPLEATYDEYSVVARLDDSRIVGDIDRLLVTPDAYHIIDYKT
NDLSSTTTDTLADHYRPQMLAYALALFQHDPARQVRASLRFTDVGVEERFEWQRSELTDI
ESELRSMLELVS
NT seq 3639 nt   +upstreamnt  +downstreamnt
atgactgaggaacccgaggagattcagctcacagaggaacaggaggacgcgctcgtccag
ggccggaacgtcgcgatcactgccggcgccgggacggggaagacgacaacgctcaccgag
cggtacgtgacgatactggccgaaaacccatcgctcacgccggagaacatcgttacgatc
accttcacacgaaaggccgctgccgaactgaccgagcgcgttcgggaggaggtgtacgac
cggctcgaggctgtcgactcaccagaagcctatcaccgctggcgaaacgtcctcgacgac
ctggaggatggctacgtccacaccattcacgcgttctgtacgcggctcttgcgagaacgg
gccgtcgaggctccggtcccgctcggcttcgacgtactcgacgaagacggcgctgcgaca
ctccaacgcgaagtcgtgacggagtttctcgaacgcaacctggacgatgacgacgtcgcg
ctactcgctcagctttggggtcgcgaccagctggtcgatgtactcactggactactcgat
gagcgcccacagagcgaggcggtcctcgaggagtggcgtgatgcggaggtcaacgactac
gtcgatatctgctgggaggtcgtttgtgatctcgacgtcgccgacgcccgacagacgctg
tatgcggacggactccttgagcagctacgcacggttgcgggccgtgtcgaccgcgagggc
gctatcgccgacgaagacggtcttcgagcctaccggaccttcaccgaagtcgcgaccaca
ctctcggccgacccggaggaaagcgatcctcgcgactgtcaacgggcaatcctcgagctc
tacgaggcctgtgagaagaagaacggcggcctgtacagcagttcggggtacgtcgtcggt
gaccgggacgattggggtgagtacggtgacgtctacgacgacctgaaagacaccatcgac
acggtcatcgatgccgtcgaaccgcacgcggatgcggtcgagacgacgcccggtgagctc
gaagcgaacagcgctcactacgcgctcgccctaatgcgcgtcttcaacgacgtcctcgcc
gcctacgccgacgagaaggagcgccgcgatacgctcgacttccccgacgtgatcgagaca
accctcgagttcttgcgagcgaacgatgtcgtcacggagcggcttcgagagcagtttgcg
gccgtgatggtcgacgagttccaggacacggacccgcgccagtgggagttagtcaagctc
ctcacgggcgtcgacgagcagacggcgtcgaacgtcttcctggtcggcgacgagaaacag
agcatctacggattccgcggggccgacgtgacgacgttcggggatgcgcgcagagaactc
cagaccgtcaacgaggctcgtggggttgacgacgttcccgacagcgacggcgagagtccg
accgccctcgaactctccgggaatttccggacgctggacgagccgttgtcgttcctgaac
gagctcttcgagtacctgttccaaccagaaggtgacacccacgaaccctacgaagcgcca
cctcagggactgagtacgcagcgcgaccgtgtcgaggacatcgagggactgaccgggagt
gtcgagtatctcgctgtccccgacgacgccgatacggcagcggagctcttcggcgacgac
catccggtcgccgaaggcgcgctcgaccacaccatcgaggccgaagcgcaagcgctcaca
gctcgactgacccacctgttcgacgatccgccgcaagtccaagaccccgacacaggtgct
catcgtgacgctacgccggacgacacggcaatcctcctccgccgacgaactcatctggat
cggtatcagcgcgctctcgagaagtacgacatcccctacactgtcgtcggtggcgtcgga
ttctacgatacgcctgaggtccaggcgctcacgaacctgcttcgagttctcggtgatcca
caggacgatgtctccctctacggggtgcttcggtcgccgctgttcggattcgcggatgat
cgtctcgcaccggcggtcgcagaggccaattcagtgtgggatgcgctcgccgaggcggac
gatccacagctcgcggacgcgttcgacctccttacgacgtggcggaccctcagcggctgt
gcgacgccgtctgaggatggcgtcctcccgtggaaccgcctgctgtcccgagtgatcgat
gacacggggtatctggctagtgtgagtgctgatgaacgcggtcgacaggccgtcgcgaac
gtcgagaagttccgcgaccaggtccgtacctggagcgagaacggtgttcatacagctgcc
gggttgctccaccggatcgaccgccaagccgagatcgatccccgagagggggaggctgac
attcccggtgatgttgagggagttcggataatgacgattcacgccgcgaagggactcgag
ttcccaatcgtcactgttcccgatctcggaagtgacctcaatttcgggcggtccgtcgat
gaccacggctatgtccgcctcgtcaaggggacgactgatgctccaccgattcctgccgtg
ggtggtccccaccccaacgatgcgttctcaatcgaaaagacggcagtccacgaatatgct
gatcgtcgctcgctcccgcaagagcgtgcggaatccaaacgactgctctacgtggcctgt
acccgaactcgggaccacctgctgttgtgtgggacacacgatatcgatatcgatgagtct
ggacacatcgaactcggtgagccagatgatttcgacgacgccagccgatggcgggattgg
ctccagccaattctgtttgacgaccaagagctagtcgctgaggcggttcacgagggagct
acggacgctcgaatcggtgacgcttcatacactattcagacgccacctcggccggttgaa
tggcagtctgaggctccgagtgaagaggtagaccctgcgattactgtcccctccccgcca
gaacaacaggccgctgttcgcgttgccgcgacgactctcgtcagtgctgttgcggatgcc
tacgaggacggacatagctacacgacgggggatgagacaatcggattgagtccgaccacc
ttcggaactgttgtccatcggctcaatgagctccgtcctccacgggatgagtggccctcg
ttcattcgtcagttgagtcgtatgggaggtgaggaaccgacggatggcgacctccaagca
gccgtgagccatgcccaggatgcgatccggttcgtcgatgaaactgaggcggacctccca
ctcgaagcgacctatgacgagtactcagttgtcgctcgtctcgatgattcccgcatagtg
ggtgatattgaccgtcttctggtcactcctgatgcgtatcatatcatcgactacaagacg
aacgatctttcgtcgacgacgactgataccctcgctgaccactatcggccgcaaatgctt
gcctacgctctcgcgctcttccagcacgatcccgcccggcaggttcgtgcttcactccgg
tttaccgatgttggggtggaagaacggtttgagtggcaacggagtgaactgactgatatc
gaatctgaacttcgctctatgttggagctcgtctcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system