KEGG   Helicobacter heilmannii: BN341_630
Entry
BN341_630         CDS       T02626                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
hhm  Helicobacter heilmannii
Pathway
hhm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hhm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BN341_630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhm03400]
    BN341_630
DNA repair and recombination proteins [BR:hhm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BN341_630
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BN341_630
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB UVR ResIII DEAD SWI2_SNF2 DUF87 UB2H Kinesin UBA LCAT
Other DBs
NCBI-ProteinID: CCM73267
Position
complement(58704..60671)
AA seq 655 aa
MSQMDFILQAPYQPSLEQEKAVTKLARGVADGVAYQTLLGVTGSGKTFSMAYLISKLQMP
TLVMSHNKTLCAQLYSEFKSFFPKNHVEYFISYFDYYQPESYIPRRDLFIEKDSAINEDL
ERLRLSAITSLLGYDDVVVVASVSANYGFGDPVEYLSMLTKLEVGQSLPYSEFLHKLVEM
GYERQEILERGRFRVVGERVDIFPAYNDTNFIRVEFFGDEIERIYSFDALENKPLKALES
YVLYAANAFIVSQSRLKRALKSIEIELNARLKFFKDHNKPLEYERLKTRTEFDLEMMAAT
GICKGIENYSRHFTDKKAGDTPYTLLDYFAQKKRPFLVIVDESHVSLPQFKGMYAGDHSR
KQVLVDYGFRLPSALDNRPLKYEEFITKPPHFLFVSATPNPLELELSKEHIAEQIIRPTG
LLDPEYEIRPTQNQVQDLYNTIKEVVARKERVLVTTLTKKMSEELCKHYLEGGLKVQYLH
SDIDAIERNHLIRSFRLGEFDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSATALIQ
TMGRVARHIHGKVIFYADKITASMQEAMTTTDSRRAKQIAFNKAHHITPKSTARPLEEEL
KDYTPPKPKATDKMPKKEKEQLIKKLRAQMQERARVLDFEAAAKLRDEIARIRGL
NT seq 1968 nt   +upstreamnt  +downstreamnt
gtgagccaaatggactttatcctacaagccccctaccaaccaagcctagagcaagaaaag
gcggtaaccaaactagcccgtggcgtggctgatggggtggcttatcaaaccttattaggc
gttacgggcagcggcaagacctttagcatggcctatctcatttctaaattgcaaatgccc
accttagtcatgtcgcataacaagaccctttgcgcccagctttacagcgagtttaaaagc
tttttccctaaaaaccatgtggagtattttatctcctactttgactactaccagcccgag
tcctatatcccaagacgggatttattcattgaaaaggacagcgcgatcaatgaagattta
gagcgcttgcgcctaagtgccatcacttcgcttttaggctatgacgatgtggtggtggtg
gcgagcgtgtcggcaaactatggctttggcgaccctgtggagtatttaagcatgctcacc
aaattagaggtggggcagagcctaccctacagcgagtttttacataagctggtggagatg
ggctatgagcggcaagaaatcctagagcgggggcggtttcgagtggtgggcgagagggtt
gatattttccccgcctacaacgacaccaactttatccgcgtggagttctttggcgatgag
atcgagcgcatttatagttttgacgcgctggagaacaagccgctcaaagccctagaaagc
tatgtgctttacgccgccaacgccttcattgtgagccaaagccgccttaaacgcgcgcta
aagagcattgaaatcgagctaaacgcccgtttaaaattctttaaagaccataacaaaccc
ctagaatatgagcggctcaaaacccgtacagaatttgacttagagatgatggcagccacg
ggcatttgtaaggggattgaaaactactcacggcatttcaccgacaaaaaggcgggcgac
acgccctacaccctgctagactacttcgcccaaaaaaaacgcccctttttagtcatcgtg
gacgaatcgcatgtgagtttgcctcaatttaagggcatgtatgcgggcgatcacagccgt
aagcaagtgttagtggattatggctttaggctgccctctgcactagacaaccgccccctc
aaatacgaagagtttatcaccaagcccccccattttctctttgtctctgccaccccaaac
cccctagagctagagctctctaaagagcacattgccgagcaaatcatccgccccacgggg
ctactagaccccgagtatgaaatccgccccacgcaaaatcaggtgcaagatttatacaac
acgattaaagaggtcgtggcgcgtaaagagcgggtgttggtaacgacccttaccaaaaaa
atgtctgaagagctgtgtaagcactatttagagggggggctaaaggtgcaatacctacac
agcgacatagacgcgattgagcgcaaccacctaatccgctcctttaggctgggcgaattt
gatgttttgattggcattaacctgcttagagaggggctagacctgcccgaggtgtctttg
gtggcgattttggacgcggataaggaggggtttttacgaagcgcgaccgctttaatccaa
accatggggcgggtggcgcgccatatccacggcaaggtgattttctacgccgataaaatc
accgcgagcatgcaagaggcgatgaccaccaccgatagcaggcgcgccaaacaaattgcc
ttcaataaagcccaccatatcacgcccaaaagcacggcacgccccctagaagaggagctt
aaagactacaccccgcccaaacccaaagccacggacaaaatgcctaaaaaagaaaaagag
cagttgattaaaaagttgcgcgcccaaatgcaagagcgggcgcgggtgcttgactttgaa
gcggcggcaaaattgcgcgatgaaattgcccgaattagagggctgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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