KEGG   Helicobacter pylori Shi417: HPSH417_00035
Entry
HPSH417_00035     CDS       T02039                                 
Symbol
groEL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
hhr  Helicobacter pylori Shi417
Pathway
hhr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HPSH417_00035 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hhr03019]
    HPSH417_00035 (groEL)
   03110 Chaperones and folding catalysts [BR:hhr03110]
    HPSH417_00035 (groEL)
   03029 Mitochondrial biogenesis [BR:hhr03029]
    HPSH417_00035 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hhr04147]
    HPSH417_00035 (groEL)
Enzymes [BR:hhr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     HPSH417_00035 (groEL)
Messenger RNA biogenesis [BR:hhr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HPSH417_00035 (groEL)
Chaperones and folding catalysts [BR:hhr03110]
 Heat shock proteins
  HSP60 / Chaperonin
   HPSH417_00035 (groEL)
Mitochondrial biogenesis [BR:hhr03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    HPSH417_00035 (groEL)
Exosome [BR:hhr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HPSH417_00035 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   HPSH417_00035 (groEL)
  Exosomal proteins of breast cancer cells
   HPSH417_00035 (groEL)
  Exosomal proteins of colorectal cancer cells
   HPSH417_00035 (groEL)
  Exosomal proteins of bladder cancer cells
   HPSH417_00035 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AFH97177
Position
complement(5438..7078)
AA seq 546 aa
MAKEIKFSDNARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KATEAIINELKKASKEVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAVLTGGQVI
SEELGLTLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVEKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG
GMGGMM
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggcaaaagaaatcaaattttcagataacgcaagaaaccttttatttgaaggcgtgaga
caactccatgacgctgtcaaagtaaccatggggccaagaggcaggaatgtgttgatccaa
aaaagctatggcgctccaagcatcaccaaagacggcgtgagcgtggctaaagagattgaa
ttaagttgcccggtagctaacatgggtgctcaactcgttaaagaagtagcgagcaaaacc
gctgatgccgccggcgatggcacgaccacagcgaccgtgcttgcttatagcatttttaaa
gagggcttgaggaatatcacggctggggctaaccctattgaagtgaaacgaggcatggat
aaagccactgaagccattattaatgagcttaaaaaagcgagcaaagaagtaggcggtaaa
gaagaaatcacccaagtagcgaccatttctgcaaactccgatcacaatatcgggaaactc
atcgctgacgctatggaaaaagtgggtaaagacggcgtgatcaccgttgaagaagctaag
ggcattgaagatgaattagatgtcgtagaggggatgcaatttgatagaggctacctctcc
ccttattttgtaacaaacgctgagaaaatgaccgctcaattggataacgcttacatcctt
ttaacggataaaaaaatctctagcatgaaagacattctcccgctactagaaaaaaccatg
aaagagggcaaaccgcttttaatcatcgctgaagacattgagggcgaagctttaacgact
ctagtggtgaataaattaagaggcgtgttgaatattgcagcggttaaagctccaggcttt
ggggacagaagaaaagaaatgctcaaagacatcgctgttttaaccggcggtcaagttatt
agcgaagaattaggcttgactttagaaaacgctgaagtggagtttttaggcaaagccgga
aggattgtgattgacaaagacaacaccacgatcgtagatggcaaaggccatagccatgat
gtcaaagacagagtcgcgcaaatcaaaacccaaattgcaagcacgacaagcgattatgac
aaagaaaaattgcaagaaagattggctaaactctctggcggtgtggctgtgattaaagtg
ggcgctgcgagtgaagtggaaatgaaagagaaaaaagaccgggttgatgatgcgttgagc
gcgactaaagcggctgttgaagaaggcattgttattggtggcggtgcggctctcattcgt
gcggctcaaaaagtgcatttgaatttacacgatgatgaaaaagtgggctatgaaatcatc
atgcgcgccattaaagccccattagctcaaatcgctatcaatgccggttatgatggcggt
gtggtcgtgaatgaagtggaaaaacacgaagggcattttggttttaacgctagcaatggc
aagtatgtggatatgtttaaagaaggcattattgaccccttaaaagtagaaaggatcgct
ttacaaaatgcggtttcggtttcaagcctgcttttaaccacagaagccaccgtgcatgaa
atcaaagaagaaaaagcaaccccagcaatgcctgatatgggtggcatgggcggtatggga
ggcatgggcggcatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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