KEGG   Candidatus Pantoea carbekii: HHS_07400
Entry
HHS_07400         CDS       T02865                                 
Symbol
uvrB
Name
(GenBank) UvrB protein
  KO
K03702  excinuclease ABC subunit B
Organism
hhs  Candidatus Pantoea carbekii
Pathway
hhs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hhs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HHS_07400 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhs03400]
    HHS_07400 (uvrB)
DNA repair and recombination proteins [BR:hhs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HHS_07400 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HHS_07400 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD Helicase_C_2 AAA_22 DUF87
Other DBs
NCBI-ProteinID: BAO00710
UniProt: U3U6V5
Position
complement(1029473..1031494)
AA seq 673 aa
MSKVFKLNSSFQPAGDQPKAINTLKEKLKHGVSHLTLLGVTGSGKTFTIANVIADLNRPA
ILIAPNKTLAAQLYGEMKEFFPENAVEFFVSYYDYYQPEAYLPSSDTFIEKDTAVNEHIE
QMRLSATKAILERRDVIIIASVSAIYGLGDPKLYFKMILHLSHGMIIDQRTILGHLAELQ
YVRNDQSFKRGMFRVRGEVIDIFPAELDAVALRIELFDDQVQRLSLFDPFTGQLKSLIAR
FTIYPKNNYVTPRVYMLQAIQKIKEDLQIRCDEFRKSNKFLEAQRIKQRTQFDLEMMQEI
GYCSGIENYSCYFSKRHANQPPPTLLDYLPSDGLLVIDESHVTIPQIFGMYRGDRARKET
LVEHGFRLPSALDNRPLRFEEFEALSLQTIYISATPGNYELKKSDGQVINQIVRPTGLLD
PILEIRPILTQVDDLISEISERVQFNERILVTTMTKRMAENLTEYLEENGKKVRYLHSDI
DTVERVEIIRDFRIGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVKGKAILYADSVTPSMFRAISETERRRKKQKQYNQKHGLIPKGIKKNITDILKCG
NNIIKSRTKRIQCLFDMPETAINYLTFTPQVIQKKIRQLEQKMQKHAKNLEFEEAARIRD
QLYKLRSTMIQNT
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgagtaaagtttttaaactcaattcctctttccaacctgcaggagaccaacctaaagct
attaacactttgaaagaaaaattgaaacatggagtatctcatctaacattattaggagtt
actggatccggcaagacttttaccatcgctaatgttattgcagatcttaacaggccggca
atactgatagcaccaaataaaacattagcagcacagttgtatggtgaaatgaaagaattt
tttccagaaaatgcagtagaattttttgtttcttattatgattactatcaacctgaagca
tatcttccaagttccgacacttttattgaaaaagatactgccgttaacgaacatattgag
caaatgcgtttgtcagctactaaagcaatactcgaacgtcgtgacgttattataatagca
tctgtttcagcaatttatggtctaggtgatccaaaactttattttaagatgatcctacat
ctatcgcatggtatgattattgatcaacgtaccattttaggccatttagctgaattgcaa
tatgtgcgcaatgatcaatctttcaaacgaggtatgtttcgtgtacgtggggaagtgatt
gatatttttcctgccgaattagatgcagttgcattgcgtattgaattatttgatgatcag
gtacaacgtttatcattattcgatcccttcacgggtcagttaaaatcattgattgcacgt
tttactatttatcctaaaaataattatgtaacaccgcgggtatatatgttacaagcaata
caaaaaatcaaagaagatcttcaaatacgttgcgatgaatttagaaaaagtaataagttt
ttagaagcccagcgtatcaaacaacgcacacaattcgatttagaaatgatgcaagaaatt
ggttattgctcaggcattgaaaattattcttgttatttttctaaacggcacgctaatcaa
ccaccaccaactttattagattatttaccgtctgatggtcttttagtaatagatgaatca
catgttacaattccacaaatttttggcatgtatcgtggcgatcgtgcacgtaaagaaaca
ttagtagaacatggttttcgtttaccatcagcattagataaccgtcctttgcgatttgaa
gaatttgaagcattatcgctacaaactatttatatttctgctacaccgggcaattatgaa
cttaaaaaatctgatggtcaagtaattaatcaaattgtacgtcctacaggactgctcgat
cctattttagaaattcgtccaattttaacacaggtagacgatttaatttcagaaattagt
gaacgagttcaatttaatgaacgtatattagtaactaccatgaccaaacgtatggctgaa
aatcttactgaatatcttgaagaaaatggtaaaaaagtacgttatttacattcagatatt
gatactgtagaacgtgtagagataattcgagattttcgtataggtaaatttgatgtatta
gtaggaattaaccttcttcgtgaaggtttagatataccagaagtttcactagtagcaata
ttagatgcagacaaagaaggttttttgagatctgagcgttctttgattcaaacaattggt
cgtgcagcacgtaatgtaaagggaaaggctattctttatgcggatagcgttacaccatcc
atgtttcgtgctatttcagaaactgaacgacgtcgaaaaaaacagaaacaatataaccaa
aaacatggtctaataccaaaaggtattaaaaaaaacattactgatattcttaagtgcggt
aataatataataaaatcacgcactaagagaatacagtgcttattcgatatgccagaaaca
gcaattaattatctaacatttacaccacaggtaatacaaaaaaaaattcgccaattagaa
caaaaaatgcaaaaacatgcgaaaaatttagaatttgaagaagcagcacgaattcgtgat
caattgtataagttacgtagcactatgattcaaaatacttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system