KEGG   Haemophilus influenzae C486: NTHIC486_01557
Entry
NTHIC486_01557    CDS       T03721                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hic  Haemophilus influenzae C486
Pathway
hic03420  Nucleotide excision repair
hic03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NTHIC486_01557 (uvrD)
   03430 Mismatch repair
    NTHIC486_01557 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hic03400]
    NTHIC486_01557 (uvrD)
Enzymes [BR:hic01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NTHIC486_01557 (uvrD)
DNA repair and recombination proteins [BR:hic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NTHIC486_01557 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     NTHIC486_01557 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 Viral_helicase1 AAA_12 PhoH RlmN_N
Other DBs
NCBI-ProteinID: AJO90236
Position
1606436..1608619
AA seq 727 aa
MMDISELLDGLNDKQREAVAAPLGNHLVLAGAGSGKTRVLTHRIAWLIAVENISEGSIMA
VTFTNKAAAEMRHRIQSTLAKHAQHQLFGMWIGTFHSIAHRLLRAHHLDVGLPQDFQILD
SEDQRRLIKRLLKLHNFDEKAFPPKQACWYINNKKDEGLRPNDIEDFNDRQEREWIKIYQ
IYQDTCDRAGLVDFAELLIRVYELFEKKPLILQRYQQRFQHILVDEFQDTNKIQYKWIKI
LAGKTGKVMIVGDDDQSIYGWRGAQIENIQKFLKDFKAETIRLEQNYRSTANILNSANEL
IANNSDRLGKNLWTEGEKGDPVGIYSAFNELDEAKFVASQIQDWVEHGGKLDDCAVLYRS
NSQSRVIEEALIRCQIPYRIYGGMRFFERQEIKDALAYLRLINNRQDDAAFERVINTPTR
GIGDRTLDILRNLTRERQITLWQAVQVATQENMLAGRASTALLRFQELINSLQLDTAEMP
LFAQTDFVIKHSGLYEMYQQEKGEKGEVRIENLEELVTATREFIKPDDAEEMTELTAFLT
HASLEAGEEQASPHQSCVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEER
RLAYVGITRAQKKLTISYAESRRLYAKEERHLPSRFIAELPRECIQEIRLRGTVTRAMNL
AKVGSLSNTSAVENEWKMGQKVKHEKFGFGTVINVEGSENNTRLQIAFQAQGIKWLIAHL
ATLEKVR
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgatggatatttctgaattacttgacggactcaacgataaacaacgcgaagccgtagct
gctcctcttggtaatcacttagtgctagctggtgcaggctcgggcaaaacgcgtgtattg
acgcaccgtattgcttggttaattgcggtcgaaaatatttctgaaggcagcattatggcg
gtgacctttaccaataaagccgcagcagaaatgcgtcatcgtattcaatctacccttgcc
aaacacgcacaacatcaattatttggtatgtggattggcaccttccatagcattgctcat
cgtttgttgcgagctcatcatttagatgtgggattgccacaagatttccaaattttagat
tcagaagatcaacgtcgtttaattaaacgattattaaaattacataattttgatgaaaaa
gcttttccgcctaaacaggcttgttggtacatcaataacaaaaaagatgaaggcttgcga
ccaaatgatattgaagattttaatgatcgccaagaacgtgaatggattaaaatttatcag
atctatcaagacacttgcgatcgcgcagggttggtcgattttgctgaattattaattcgg
gtctatgaattatttgagaaaaaaccattaattttgcaacgttatcaacaacgttttcag
catattttggtggatgagtttcaagacaccaataaaattcaatataagtggattaaaatt
cttgctggaaaaacaggcaaagtcatgatcgtaggcgatgatgatcaatctatatacggt
tggcgtggcgcacaaattgaaaatatccaaaaattcttgaaagatttcaaagccgaaaca
attcgccttgaacaaaactaccgttctaccgccaatatcctaaacagcgcaaatgaatta
attgcaaacaatagtgatcgtcttggtaaaaatttatggacagagggtgagaaaggcgat
cctgtgggcatctattctgcctttaatgaattagatgaagcaaaatttgtcgcttcacaa
attcaggattgggtagaacatggcggaaaacttgatgattgcgctgtactttatcgtagt
aatagccaatcacgggttattgaagaagctttaattcgttgtcaaattccataccgtatt
tatggcggtatgcgtttcttcgaacgtcaagaaattaaagatgcgttagcctatcttcgt
ttgattaataatcgtcaagatgatgcggcttttgagcgtgtaattaatacgccaacccgt
ggcattggcgaccgcactttagatatattgcgtaacttaacacgcgaacgccaaattacc
ttatggcaagcagtacaagtcgcaacacaagaaaatatgttggcagggcgagcctcaaca
gccttattacgtttccaagaattaattaattcactacaacttgataccgcagaaatgccg
cttttcgcacaaactgattttgtgattaaacattcgggcttatatgaaatgtatcaacaa
gaaaaaggcgaaaaaggcgaagtgcggattgaaaatttggaagaattagttaccgcaacc
cgtgaatttatcaaacctgatgatgcggaagaaatgaccgaactcactgcctttttaact
catgcctctttagaagctggtgaagaacaagcctcgccgcatcaatcttgtgtagaaatg
atgacgttgcactctgcgaaaggcttagaatttcctcgtgtatttatggtgggcgtagaa
gaaggattattcccaagttttcgttcttttgaagaacccggacgtttagaagaagagcgt
cgtttagcttatgtcggtattactcgcgcacagaaaaaactgaccatctcttatgcggaa
agccgtcgattatatgccaaagaagaacgccatttgccatcacggtttatcgcagaatta
ccgagagaatgtatccaagaaattcgtttacgagggacagtcacgcgtgcgatgaaccta
gcaaaagtcggttcattgtcgaataccagtgcggtcgaaaatgaatggaaaatgggtcaa
aaagttaaacacgaaaaatttggtttcggcacagtgattaatgtggaaggatctgaaaat
aacacacgtttacaaatagcgttccaagctcaaggcattaaatggttgattgcgcatttg
gcaacattggaaaaagtgcggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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