KEGG   Haemophilus influenzae F3047 (nontypeable): HICON_01080
Entry
HICON_01080       CDS       T01400                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hil  Haemophilus influenzae F3047 (nontypeable)
Pathway
hil03420  Nucleotide excision repair
hil03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HICON_01080
   03430 Mismatch repair
    HICON_01080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hil03400]
    HICON_01080
Enzymes [BR:hil01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HICON_01080
DNA repair and recombination proteins [BR:hil03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HICON_01080
   MMR (mismatch excision repair)
    Other MMR factors
     HICON_01080
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 Viral_helicase1 AAA_12 PhoH RlmN_N
Other DBs
NCBI-ProteinID: CBY87393
Position
1806067..1808250
AA seq 727 aa
MMDISELLDGLNDKQREAVAAPLGNHLVLAGAGSGKTRVLTHRIAWLIAVENISEGSIMA
VTFTNKAAAEMRHRIQSTLAKHAQHQLFGMWIGTFHSIAHRLLRAHHLDVGLPQDFQILD
SEDQLRLIKRLLKLHNFDEKAFPPKQACWYINNKKDEGLRPNDIEDFNDRQEREWIKIYQ
IYQDTCDRAGLVDFAELLIRVYELFEKKPLILQRYQQRFQHILVDEFQDTNKIQYKWIKI
LAGKTGKVMIVGDDDQSIYGWRGAQIENIQKFLKDFKAETILLEQNYRSTANILNSANEL
IANNSDRLGKNLWTEGEKGDPVGIYSAFNELDEAKFVASQIQDWVEHGGKLDDCAVLYRS
NSQSRVIEEALIRCQIPYRIYGGMRFFERQEIKDALAYLRLINNRQDDAAFERVINTPTR
GIGDRTLDILRNLTRERQITLWQAVQVATQENMLAGRASTALLRFQELINSLQLDTAEMP
LFAQTDFVIKHSGLYEMYQQEKGEKGEVRIENLEELVTATREFIKPDNAEEMTELTAFLT
HASLEAGEEQASPHQSCVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEER
RLAYVGITRAQKKLTISYAESRRLYAKEERHLPSRFIAELPRECIQEIRLRGTVTRAMNL
AKVGSLSNTSAVENEWKMGQKVKHEKFGFGTVINVEGSENNTRLQIAFQAQGIKWLIAHL
AKLEKVR
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgatggatatttctgaattacttgacggactcaacgataaacaacgcgaagccgtagct
gctcctcttggtaatcacctagtgctagctggtgcaggatcgggcaaaacgcgtgtattg
acgcaccgtattgcttggttaattgcggtcgaaaatatttctgaaggcagcattatggcg
gtgacgtttaccaataaagccgcagcagaaatgcgtcatcgtattcaatctacccttgcc
aaacacgcacaacatcaattatttggtatgtggattggcaccttccatagcattgctcat
cgtttgttgcgagctcatcatttagatgtgggattgccacaagatttccaaattttagat
tcagaagatcaacttcgtttaattaaacgattattaaaattacataattttgatgaaaaa
gcttttccgcctaaacaggcttgttggtacatcaataacaaaaaagatgaaggcttgcga
ccaaatgatattgaagattttaatgatcgccaagaacgtgaatggattaaaatttatcag
atctatcaagacacttgcgatcgcgcagggttggtcgattttgctgaattattaattcgg
gtctatgaattatttgagaaaaaaccattaattttgcaacgttatcaacaacgttttcag
catattttggtggatgaatttcaagacaccaataaaatccaatataaatggatcaaaatt
cttgctggaaaaacaggcaaagtcatgatcgtaggcgatgatgatcaatctatatacggt
tggcgtggtgcgcaaattgaaaatatccaaaaattcttgaaagatttcaaagccgagaca
attctccttgaacaaaactatcgttctaccgccaatatcctaaacagcgcaaatgaatta
attgcaaacaatagtgatcgtcttggtaaaaatttatggacagagggtgaaaaaggcgat
cctgtgggcatctattctgcctttaatgaattagatgaagcaaaatttgtcgcttcacaa
attcaggattgggtagaacatggcggaaaacttgatgattgcgctgtactttatcgtagt
aatagccaatcacgggttattgaagaagccttaattcgttgtcaaattccatatcgtatt
tatggcggtatgcgtttcttcgaacgtcaagaaattaaagatgcgttagcctatcttcgt
ttgattaataatcgtcaagatgatgcggcttttgagcgtgtaattaatacgccaacccgt
ggcattggcgaccgcactttagatatattgcgtaacttaacacgtgaacgccaaattacc
ttatggcaagcagtacaagtcgcaacacaagaaaatatgttggcagggcgagcctccaca
gccttattacgtttccaagaattaattaattcattacaacttgataccgcagaaatgccg
cttttcgcacaaactgattttgtgattaaacattcgggcttatatgaaatgtatcaacaa
gaaaaaggcgaaaaaggcgaagtgcgtattgaaaatttggaagaattagttaccgcaacc
cgtgaatttatcaaacctgataatgcggaagaaatgaccgaactcactgcctttttaacg
cacgcttccttagaagctggcgaagaacaagcctcgccgcatcaatcttgtgtagaaatg
atgacgttgcactctgcgaaaggcttagaatttcctcgtgtatttatggtgggcgtagaa
gaaggattattcccaagttttcgttcttttgaagaacccggacgtttagaagaagagcgt
cgtttagcttatgtcggtattactcgcgcacagaaaaaactgaccatctcttatgcggaa
agccgtcgattatatgccaaagaagaacgccatttgccatcacggtttatcgcagaatta
ccgagagaatgtatccaagaaattcgtttacgagggacagtcacgcgtgcgatgaaccta
gcaaaagtcggttcattgtcgaataccagtgcggtcgaaaatgaatggaaaatgggtcaa
aaagttaaacacgaaaaatttggtttcggcacagtgattaatgtggaaggatctgaaaat
aacacacgtttacaaatagcattccaagcgcaaggcattaaatggttgattgcgcatttg
gcaaaattggaaaaagtgcggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system