KEGG   Heterobasidion irregulare: HETIRDRAFT_448878
Entry
HETIRDRAFT_448878 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
hir  Heterobasidion irregulare
Pathway
hir03022  Basal transcription factors
hir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HETIRDRAFT_448878
  09124 Replication and repair
   03420 Nucleotide excision repair
    HETIRDRAFT_448878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hir03021]
    HETIRDRAFT_448878
   03400 DNA repair and recombination proteins [BR:hir03400]
    HETIRDRAFT_448878
Enzymes [BR:hir01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     HETIRDRAFT_448878
Transcription machinery [BR:hir03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     HETIRDRAFT_448878
DNA repair and recombination proteins [BR:hir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     HETIRDRAFT_448878
SSDB
Motif
Pfam: HBB DEAD_2 Helicase_C_2 DUF4932
Other DBs
NCBI-GeneID: 20675892
NCBI-ProteinID: XP_009542728
JGI: Hetan2_448878
UniProt: W4KJ92
Position
Unknown
AA seq 1328 aa
MSTSKRIRIPSLKAREALYQDQPDPAQPPSVRRKATKRRASEPADDDLSPADNEYDDPHP
HPHPHSKRARTTESLDDDMDVDIDGDGDGDVAPLDEDPGYLSDAAHSAKHARLSRASSSA
SQRRERPKSRKERTPVVVTPAPSSSKTRKKRHVVYSDDEDPFEDAVGYRDAKDVDIDDDG
DDDEEEPEPAAKRLPTVRLKLGKAGGDAKGKEKAGKSATKEREEHTPPAPKRAKLRDPSP
EIDEQDAAAAPAPAPAAPEAQKDAGPTPLPSFKKRKLPPIKKNKPAGASTSSAHPSQVPA
AKARPRPAEGAKAGEAGEADDGLPVLKKPAQRAGNVEVDLSNKDIYASLFKSVRAPARVC
FVADGGLFFTQAGASTPRSGLNKNQKEERRKELDKLRDADRARRVAEAERAFDLRGQYDK
IATFVDRLGARRSSAMWPNIMAAAWRYEKEKEEKRRERDRVREKSVRERENGEVVDERGS
DLSRDQGGGGGAATHVWMDAGGRHGASQAAPAMKFYIDDLPIVFPYDRIYPEQYAYMCDL
KRTIDATGHCVLEMPSGESSRSLSLSLSRARAPHLTRTQFFPVKRKLVYCSRTVPEIEKA
LSELKRLMEYRVAVAESDDDRRKEQAFTGIGLTSRKNLCIHPEVAKEKKGKVVDARCRDL
TNSAVCERARNDPGSVETCGFHDNLGDMEAGQLIPPGIWTLADVLQNGRDKGVCPYFTVR
RMMPFVDIVIYSFHYLLDPKVAEQVSKDISKDAIVVFDEAHNIDNVCLESLSIDLTRPML
DSASRSVNKLADKINEIKQTDASKLQDEYAKLVEGLQEAAADEDAFMSNPVLPEDLLTEA
VPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAER
LQSLVKTLELSRIDEYAALQKVASFATLVATYEKGFLLILEPFETENATVPNPIFHFVCL
DPAIAIKPVFERFSSVVITSGTLSPLDMYPKMLQFTPVVQETYAMTLTRNSFLPLARPAD
QVAISSRFEVRNDPAVVRNFGTILVEYSKIVPDGVVAFFPSYLYMESIVAAWNDMGILNE
VWKHKLIFVETPDANETSIALENYRRACDNGRGAVLLSVARGKVSEGIDFDHNYGRAVIM
VPYQYTESRILKARLEYLRDAYRIRESEFLGFDAIRNAAQCVGRALRGKTDWGLMVFADK
RFARADKRAKLPRWINQYITETAANLSTDMALSLSKLFMRTISQNAGENLTGVSLWTLED
VRKAQAAQREAAAEAEAARAAMERAAAEAEGGGTMDVDEDDEEDEEYGDGGFSDRMLQDA
GTVDGYTD
NT seq 3987 nt   +upstreamnt  +downstreamnt
atgtccacctccaagcgaatccgcattcccagtctcaaggccagagaggccctctaccag
gaccagcccgaccccgcccagccgccctccgtccggcgcaaggccaccaagcggcgcgcc
tccgagcccgcagacgacgacctgtcccccgccgacaacgaatacgacgacccgcacccg
cacccgcacccgcacagcaagcgcgcgcgcacgacagagtcgctcgatgacgacatggac
gtcgacattgatggcgacggcgacggcgacgtcgccccgctcgacgaggaccccggctat
ctctccgacgccgcccactcggccaagcacgcccgcctgtcccgcgcctcctcctccgcc
tcccaacggcgcgagcggcccaagagccgcaaggagcgcacacccgtcgtcgtgacgccc
gcgccctcgtcctccaaaacccggaagaagcggcacgtggtctactcggacgacgaggac
ccgttcgaggacgccgtcggctaccgcgacgccaaggacgtcgacatcgacgacgatggc
gacgacgacgaggaggagcctgaacccgccgcgaagcgcctcccgacggtgaggttgaag
ctgggcaaggccggaggcgacgcaaaaggaaaagaaaaggccggcaaatcggccacaaaa
gagagggaggagcacacccctcccgcgcccaagagggcaaagctccgggacccctcaccc
gaaatcgacgagcaggacgccgcggcggcgcccgcgcccgcgcccgcggcgccggaagcc
cagaaggacgcagggcccacgcccttgccgtcgttcaagaaacgcaagctgcctccgatc
aagaaaaacaagccggcgggcgcgagcacctcctccgcgcacccgagccaggtgcccgcg
gcgaaagcgcggcccaggcccgccgagggcgccaaggcgggcgaggcgggcgaggcggac
gacgggctgcccgtgctgaagaagcctgcgcagcgggcggggaacgtcgaggtggacctg
agcaacaaggacatctacgcgtcgctgttcaagagcgtacgtgcccccgcgcgggtttgt
ttcgtagctgacggcgggctgtttttcacgcaggcgggggcgagcacgccgcggtcgggg
ctgaacaagaaccagaaggaggagcggcggaaggagctggacaagctgcgggacgcggat
cgtgcgcgccgggttgcggaagccgagcgggcgttcgacctgcgggggcagtacgacaag
atcgcgacgttcgtggaccggctgggggcgcggcggagctctgcgatgtggccgaacatc
atggcggcggcgtggcggtacgagaaggagaaggaggagaagcggcgggagagggaccgg
gtgcgggagaagagcgtgcgggagcgcgagaacggcgaggtggtggacgagcgcgggtcg
gatctgtcacgggaccaggggggcggtggcggtgcggctacccatgtgtggatggacgcc
ggcggcaggcacggtgcgagccaggctgctcccgccatgaagttctacatcgacgacctc
cccatcgtcttcccctatgaccggatataccccgagcaatatgcgtacatgtgcgatctc
aagcgcaccatcgacgcaacgggccactgcgttctcgagatgccctcgggcgagtcctcc
cgctctctctctctctctctctcgcgcgcgcgcgcgccgcatctcacccgcacccagttc
ttccccgtaaagcgcaagctggtctactgctcccgcaccgtccccgagatcgaaaaggcc
ctctccgagctcaagcgcctcatggagtaccgcgtcgccgtcgcagagtccgacgacgac
cgcaggaaagagcaggccttcaccggcatcggcctcacaagccgcaagaacctctgcata
caccccgaggtcgccaaggagaaaaagggcaaggtcgtcgacgcgcgctgccgcgatctc
acgaactccgccgtctgcgagcgcgcgcggaacgacccgggctccgtcgagacctgtggc
tttcacgacaacctcggcgacatggaggccggccagctgatcccgcccggaatatggacg
ctcgcggacgtcctgcagaacgggcgcgacaagggcgtctgcccgtacttcaccgtgcgg
agaatgatgccgttcgtcgacatcgtgatctactcgttccactacctcctcgacccaaag
gtcgcggagcaggtgtccaaggacatttccaaagacgccatcgtcgtcttcgacgaggcg
cacaacatcgacaacgtctgcctcgagtctctgagcatcgacctcacgcggccgatgctc
gactccgcctcgcgcagcgtcaacaagctcgcggacaagatcaacgagatcaagcagacc
gacgcgtcgaagctgcaggacgagtacgcgaagctcgtcgagggcctgcaggaggcggcc
gcggacgaggacgcgttcatgagcaacccggtgctgccggaggacctgctcacggaggcc
gtcccgggcaacatccgcaaagcggagcacttcgtcgccttcctcaagcgcttcgtcgaa
tacctcaaaacccgcatgcgcgtgctacacgtcgtcgccgagacgccgctgtcgttcctg
cagcacctaaaagacatcacgtacatcgagcgcaggccgctccggttctgcgcggagcgc
ctgcagtcgctcgtcaagacgctcgagctgagccggatcgacgagtacgcggcgctgcaa
aaggtcgcgagcttcgcgacgctcgtggcgacgtacgagaaagggttcctgctgattctc
gagccgttcgagaccgagaacgcgacggtgccgaacccgatcttccatttcgtctgcctc
gacccggcgatcgcgatcaagcccgtgttcgagcggttcagcagcgtcgtgatcacgtcc
gggacgctctcgccgctcgacatgtacccgaagatgctgcagttcacgcccgtcgtgcaa
gagacgtacgcgatgacgctcacgcgcaactcgttcctccctctggcacgtcccgccgac
caggtggcgatcagctcgcggttcgaggtgcgcaacgaccccgccgtggtgcgcaacttt
ggcacgatcctcgtcgagtacagcaagatcgtcccggacggcgtcgtcgcgttcttcccg
agctacctgtacatggagtcgatcgtcgccgcgtggaacgacatggggatcctgaacgag
gtgtggaagcacaagctcatcttcgtcgagacgccggacgcgaacgagacgagcatcgcg
ctcgagaactatcgccgggcgtgcgacaacgggcgcggcgcggtcctgctgtccgtcgcg
cgcgggaaggtctccgagggcatcgactttgaccacaactacgggcgcgcggtcatcatg
gtgccgtatcagtacacggagagccggatcctcaaggcgcggctcgagtacctgcgcgac
gcgtatcggatccgggagtcggagttcctcgggttcgacgcgatccgcaacgcggcgcag
tgcgtcgggcgggcgttgcgcggcaagacggactggggcctgatggtgttcgcggacaag
cggttcgcgcgggcggacaagcgggcgaagctgccgcggtggatcaaccagtacatcacg
gagacggccgcgaacctgtcgacggacatggcgctctcgctctcgaagctgttcatgcgc
acgatctcgcagaacgcgggggagaacctgacgggggtgtcgctctggacgctcgaggac
gtgcgcaaggcgcaggcggcgcagcgagaggcggctgcggaggcggaggcggcgcgggcg
gcgatggagcgcgcggccgcggaggcggagggcggggggacgatggacgtggacgaggat
gacgaggaggacgaagagtacggggacggcgggttctcggacaggatgttgcaggacgcg
gggacggtggacggctatactgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (50)   

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