KEGG   Halalkalicoccus jeotgali: HacjB3_12900
Entry
HacjB3_12900      CDS       T01271                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
hje  Halalkalicoccus jeotgali
Brite
KEGG Orthology (KO) [BR:hje00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hje03016]
    HacjB3_12900 (truD)
Enzymes [BR:hje01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     HacjB3_12900 (truD)
Transfer RNA biogenesis [BR:hje03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HacjB3_12900 (truD)
 Prokaryotic type
    HacjB3_12900 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: ADJ15961
UniProt: D8J708
Position
complement(2382962..2384344)
AA seq 460 aa
MNEHLPAHPIEREVGMEFYASGSDGIGGRIRDRDGDFRVREIEDFPTEPVNADPAAYPHL
VLRVTLRGWDTNDFARRLSDAMGASRERVSWAGTKDKRAVTTQLFSVMKGEPEALPEVRG
ADIEVVGRAGRDLQFGDLAGNEFRIRVRDADPENCDAITAALREFGGGRVGVPNYFGQQR
FGSRRPVTHRVGLAIAREDWRGAVMEYLGNPRESEPEDTQAARGYVDREARRASKEGEEG
SDPLDETEDWDGALERFPRKLGFERAMLHRLVEGGAESEADFRAALETAPTNLQRLFVNA
AQSSLFNRILSERLERDLPFDRAVAGDVVCFADTDAPEGLARPDTSRTQRVTENRVETVN
RHVERGRAFVTAPLVGTETELGEGEPGAIEREVLAEAGVTTTDFDLPGEFHSTGTRRAIL
LTTDLSVKRDPLTFDFALPSGSYATVLLREYLKCDPRDLG
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgaacgagcacctccctgcccacccgatcgagcgcgaggtcggcatggagttctacgcc
agcgggtcggacggcatcggcgggcggatccgcgatcgcgacggggacttccgggtccgg
gagatcgaggactttccgaccgagcccgtcaacgccgaccccgctgcctacccgcatctc
gtgctccgggtcaccctccgaggttgggataccaacgacttcgcccgtcgcctgtcggat
gcgatgggggccagccgagagcgcgtctcgtgggccgggacgaaggacaaacgcgccgtg
accacgcaactattcagcgtgatgaagggcgagcccgaggcactccccgaggtccgcggc
gccgacatcgaggtcgtcggccgcgccggtcgggacctgcagttcggcgacttagcgggc
aacgagtttcgcatccgggttcgggacgccgaccccgagaactgcgacgcgatcacggcg
gcgcttcgggagttcggcgggggacgagtgggagttccgaactacttcggccagcagcgt
ttcggtagtcgccggcccgttacccaccgggtcgggctcgcgatcgcccgtgaggactgg
cgcggggcggtcatggagtacctcggcaatccccgcgagtccgagccggaagacacgcag
gcggccagaggatacgtcgaccgcgaggcgcgacgcgcctcgaaggagggcgaggaagga
agcgacccgctcgacgagacggaagactgggacggcgcgctcgaacggtttccccgcaaa
ctcggcttcgaacgcgctatgctccaccggctggtcgaaggcggtgcggaaagcgaggcg
gacttccgcgctgcgctcgaaaccgcgccgacgaacctccagcggctcttcgtcaacgcc
gctcaatcctccctgttcaaccggatcctgagcgagcgcctcgaacgcgatctaccgttc
gaccgtgcggtcgcaggtgacgtcgtctgttttgcggataccgacgcccccgaggggctt
gcccggccggataccagccgaacccagcgcgtgaccgaaaaccgtgtcgagacggtcaat
cgccacgtcgagcggggtcgggcgttcgtcaccgcgccgctcgtgggcaccgagaccgaa
ctcggcgagggcgaacccggcgcgatcgaacgcgaggtactcgccgaagccggagtcact
actactgacttcgacctacccggcgagttccactcgaccggcacccggcgagcgatcctg
ctgacgaccgacctctcggtcaagcgcgacccgctcacgttcgactttgcgctcccgagc
ggctcgtatgctaccgttctgctccgcgaatacctgaagtgcgacccgcgagatctgggc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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