KEGG T02129: HFX

Haloferax mediterranei: HFX_1631

Entry

HFX_1631          CDS       T02129

Symbol

gyrA

Name

(GenBank) DNA gyrase / DNA topoisomerase II subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

hme Haloferax mediterranei

Brite

KEGG Orthology (KO) [BR:hme00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hme03032]
    HFX_1631 (gyrA)
   03400 DNA repair and recombination proteins [BR:hme03400]
    HFX_1631 (gyrA)
Enzymes [BR:hme01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HFX_1631 (gyrA)
DNA replication proteins [BR:hme03032]
Prokaryotic type
  DNA Topoisomerases
   HFX_1631 (gyrA)
DNA repair and recombination proteins [BR:hme03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HFX_1631 (gyrA)

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C DUF5832

Other DBs

NCBI-ProteinID:

AFK19337

UniProt:

I3R527

Position

1555994..1558558

AA seq 854 aa
MSSDAPDTFEPDAGIAAEVKNARIEDEMEQSYIDYAMSVIAGRALPDVRDGLKPVHRRIL
YAMHEAGVTAHSSHRKSSSIVGETMGDYHPHGDSAIYDALARMAQDFSMRYPLVDGQGNF
GSVDGDPPAAMRYTEARMSPIAEELLEDIDKDTVDFQSNYDDRMQEPTVLPSSFPNLLVN
GSSGIAVGMSTNIPPHNLGEVIDATVELIENSDATVTDLMEHVKGPDFPTGANIVGRNAV
HKAYKTGRGRVRVRADYDVFEEEGRIVINELPYQENKARLIERIADDVNAGKIEGIRDIR
DESDRDGIRVVIELKRGAMAEVVKNQLLDNHLESTFGVINLALVDGQPKVLTLKETLQHY
LDHRRDVVRRRSEYELAEAEDRAHILEGRLKALENIDNVVETIRNSESRDDAKAALRGEV
TVEVDGEALPSFDFSEDQANHIVSMQLGSLTSMEAAEIEDEYEEVEATIERLETILADQS
ELDAVIEEELLEIKDEYADERRTSFVANTGEVTRADLIPEEDVVVIVSEDDYIKRMPVSR
FRAQNRGGKGIIGTDLKEGDNVSSVFVTNTHDDLLCFTNHGQVYQLKAYQVPEMSRTARG
KSAVNLLDFDDGEEITAVVNCDDLEEVDGYLTMVTQSGYIKRTSVDNFQNILSTGIIATK
LDEGDELADVEVTDGTHDLVIGTEQGMSIRFHEDEVRAMGRSARGVRGIKLEDDDVVAGV
AAIDEDHHSWVLTVTENGYGKRTDIDAYRSQSRNGKGLIDIKANERNGPVCSINTVGEGD
HLVVMSDEGQILRTPVEDISTVGRNTMGVIVMDLDAGDTVASVDVIPPKMTTEEEELEDD
ADAEAEVEAVADEE

NT seq 2565 nt +upstreamnt +downstreamnt
atgagttctgacgcaccagatacattcgaacccgacgcgggcatcgcggcggaagtgaag
aacgcacgcatcgaagacgagatggaacagtcgtacatcgactacgcgatgtcggtcatc
gcgggtcgcgcactccccgacgtgcgcgacggtctcaagccggtccaccggcgtattctc
tatgcgatgcacgaggctggcgtgaccgcccactcgtcgcaccgaaagtcctcgtccatc
gtgggcgagacgatgggtgactaccacccgcacggcgactccgccatctacgacgccctc
gcgcgcatggcgcaggatttctccatgcgctaccccctcgtcgacgggcaggggaacttc
gggtccgtcgacggcgacccaccggccgcgatgcggtacacggaagcgcggatgtccccc
atcgccgaggaactcctcgaagatatcgacaaggacaccgtcgacttccagtcgaactac
gacgaccgcatgcaggaaccgacggtcctcccgtcgtcgttcccgaacctgctcgtcaac
ggttcgtcgggtatcgcggtcgggatgtccacgaacattccgccgcacaacctcggtgag
gtcatcgacgccaccgtcgaactcatcgagaattccgacgcgaccgtcacggacctgatg
gaacacgtcaagggccccgacttcccgaccggcgcgaacatcgtcggtcgaaacgcggtc
cacaaggcgtacaagacgggtcgcggccgcgttcgcgtccgcgccgactacgacgtgttc
gaagaggaaggccgcatcgtcatcaacgaactcccgtatcaggaaaacaaggcccgcctc
atcgagcgcatcgccgacgacgtaaacgccggcaaaatcgagggcatccgcgacatccgc
gacgagtccgaccgcgacggcatccgcgtcgtcatcgaactcaaacgtggcgcgatggct
gaagtcgtcaagaaccaactgctcgacaaccacctcgaatcgaccttcggcgtcatcaac
ctcgcactggtcgacggccaaccgaaggtcctcacgctgaaagagacgctgcaacactat
ctcgaccaccgccgtgacgtggttcgacggcgctccgagtacgaactcgccgaggccgaa
gaccgcgcacacatcctcgaaggccgcctgaaggccctcgaaaacatcgacaacgttgtc
gagaccatccggaactccgagagccgagacgacgccaaagccgcactccgtggcgaagtg
acagtcgaagtcgacggcgaggcgctcccgtcgttcgacttctccgaggaccaggcgaac
cacatcgtctcgatgcaactcggttcgctcacctcgatggaagcggccgaaatcgaagac
gagtacgaggaggtcgaagcgactatcgagcgcctcgaaaccatcctcgccgatcagtcc
gaactcgacgccgtcatcgaggaggaactcctcgaaatcaaagacgagtacgccgacgag
cgacggacctccttcgtcgccaacaccggcgaggtcacgcgtgccgacctcattcccgag
gaagacgtggtcgtcatcgtcagcgaggacgactacatcaaacgcatgcctgtctcccga
ttccgcgcccagaaccgcggcgggaaaggcatcatcggtacggacctaaaagaaggggac
aacgtctcgtcggtgttcgtcacgaacacccacgacgacctgttgtgcttcaccaaccac
ggacaggtctaccaactcaaggcctaccaggtgcccgagatgtcgcgaacggcccgcggg
aagtccgcggtcaatctgctcgacttcgacgacggtgaggagattaccgccgtcgtcaac
tgcgacgacttggaggaagtcgacggctacctgacgatggtaacccagagcggttacatc
aagcgtaccagcgtcgataacttccagaacatcctttcgacgggtatcatcgccaccaaa
ctcgacgagggcgacgaactcgccgacgtggaagtcacagacggcactcacgacctcgtt
atcggcaccgagcaggggatgtccatccggttccacgaggatgaagtccgcgcgatgggt
cgttcggcccgcggcgttcgcggcatcaaactcgaagacgacgacgtagtcgccggtgtc
gccgccatcgacgaggaccaccacagttgggtgctcaccgtcaccgagaacggctacggg
aagcgtaccgacatcgacgcctatcgctcgcagtcgcgcaacgggaaaggtctcatcgac
atcaaggccaacgagcgaaacggcccggtctgctctatcaacactgtcggtgaaggcgac
cacctcgtcgtcatgtccgacgaagggcagattctccggacccccgtcgaagacatctcg
acggtcggccgcaacacgatgggcgtcatcgtcatggacctcgatgcgggcgacaccgtc
gcctccgtcgacgtgattccgccgaagatgacgaccgaagaggaagaactcgaagacgac
gcggacgctgaggcggaagtcgaagcggtcgccgacgaagagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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