KEGG   Haloferax mediterranei: HFX_2946
Entry
HFX_2946          CDS       T02129                                 
Symbol
endA
Name
(GenBank) tRNA splicing endonuclease
  KO
K01170  tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
Organism
hme  Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:hme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hme03016]
    HFX_2946 (endA)
Enzymes [BR:hme01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     HFX_2946 (endA)
Transfer RNA biogenesis [BR:hme03016]
 Prokaryotic type
  tRNA spricing factors
   tRNA splicing endonucleases
    HFX_2946 (endA)
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-ProteinID: AFK20610
UniProt: I3R8Q0
Position
complement(2856731..2857750)
AA seq 339 aa
MQGRLEDGIVHLPGDARQRFHDSRGYGRPTGGNDLEVAPVEAAHLLSRGDIDGVDGMGLR
ELLARTGTTLDFVVYKDLRDRGFYLSPTREGWPGVDDTGGADFLVYPRGKGPWDGDVEHR
VRVVGERESIPVSSLGDVVLAIVDEDGDLTYFDTEGFSPEGTATEDLPTGLDAELLSDRA
LVWDGVDRLYQNGFFGQRLYGRNADSGPLQLSLLEAAYLARQDSLAIDETDVVSRGHDVE
GDRFDRRLAVYAMLRELQTVPKSGFKFGSDFRVYTDFETVSDLSHSEFLVRVVAPEHTFV
PRDLSLDVRLAGGVRKRMVFALTSAKGEIDWLSVSRLTP
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgcaaggacgcctcgaagacggcatcgtccatctcccgggcgatgcccgacagcgcttc
cacgattcgcgcgggtacgggagaccgaccggcggcaacgacctcgaagtcgcacccgtc
gaggccgcccacctgctctcgcgcggcgatatcgacggcgtggacgggatgggtctgcgc
gaactcctcgcgcgcaccggcaccacgctcgatttcgtcgtctacaaagacctccgcgac
cgcgggttctacctctctcccacccgcgagggatggccgggtgtcgacgacaccgggggc
gcggatttcctcgtctaccctcgcggaaagggaccgtgggatggcgatgtcgaacaccgg
gtgcgcgtcgtcggcgaacgcgagtccatcccggtctcgtcgctcggcgacgtggtactc
gctatcgtcgacgaggacggcgacctgacgtacttcgacactgagggcttctccccggag
gggacggccacagaagaccttccgaccggtctcgacgccgaactcctgtcggaccgcgca
ctcgtgtgggatggcgtggaccgcctctaccagaacggcttcttcgggcagcgcctctac
ggccgcaacgccgacagcggcccgcttcaactatcgctcctcgaagccgcgtatctcgcc
cggcaggattcgctcgccatcgacgagaccgacgtggtctcccgcggccacgacgtggag
ggcgaccgattcgaccgcagactcgcggtttacgcgatgctccgggagctgcagacggtc
cccaaaagcgggttcaagttcggctccgatttccgtgtctacaccgacttcgagacggtt
tcggacctctcgcactccgaattcctcgtgcgcgtggtcgcgcccgaacacacgtttgtt
ccacgggacctctcacttgacgttcgcctcgccggcggtgtccgcaagcgaatggttttt
gcgctaaccagcgccaagggagagatagactggctttcggtcagtcggctcacgccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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