KEGG   Hydra vulgaris (swiftwater hydra): 100197379
Entry
100197379         CDS       T01080                                 
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
  KO
K10886  DNA-repair protein XRCC4
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    100197379
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hmg03400]
    100197379
DNA repair and recombination proteins [BR:hmg03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     100197379
SSDB
Motif
Pfam: XRCC4 UPF0242 AmiA-like Mur_ligase_M Exonuc_VII_L Sec20
Other DBs
NCBI-GeneID: 100197379
NCBI-ProteinID: XP_002162658
UniProt: T2ME53
Position
15:complement(14948777..15000487)
AA seq 296 aa
MNLNKVLINNQTYFIFSSFKSGINLRLTNGWEVYNGNVSEHQLSLMANRIDMCPLTFLQS
IKDAFCNNSLSELFSFDLNKMENSCELVWKKILSDETKFQLASLTLQKDNHSAPILSLLE
GAMETVQMLSRSVTKLEKDNMLLEKETNTLTKRMENYVQTKDELEQQLFSKFCLVLNEKK
ARIRYLKNELEQKTWKSNQSIENKAAKSAELESIDIYDIKRKKIDLDASHIVSRENDSIN
ILNKSIEPESFDVPKSSRRKIRSSKIGKPVAMQQSLASTSKVSEEYSADNLLNDLF
NT seq 891 nt   +upstreamnt  +downstreamnt
atgaacttaaataaagtccttataaataatcaaacatattttattttctcaagttttaaa
agtggaataaatttacgtttaactaatggttgggaagtatataacggaaatgtctctgaa
catcaactttcacttatggcaaatagaatcgatatgtgtcctctaactttcttacagtca
attaaagatgcattttgtaataatagtttatctgaattgttttcatttgatctgaacaaa
atggaaaattcatgcgagcttgtatggaaaaagattctatcagatgaaacaaagtttcaa
cttgctagtctaacactccaaaaagataatcattcagctcccatattatctttgttagag
ggagctatggaaactgttcaaatgctgtcgaggagtgtaacaaaacttgaaaaggacaac
atgttgttggaaaaagaaaccaatactttaactaagagaatggagaattatgttcaaaca
aaagatgaattagaacaacaacttttttcaaagttttgcttggttttaaatgaaaagaag
gcacgaattcgctacctaaagaatgaattggagcaaaaaacttggaaatccaatcaatca
atagaaaataaagcagcaaaaagtgcagaattagaaagtatcgatatttatgatatcaaa
cgtaaaaagatagatttagatgcttctcatattgtctccagagaaaacgattcaattaat
atattgaacaagtcaatagaacctgaaagttttgatgttcctaaaagtagtaggagaaaa
attcgctcttcaaaaatagggaaaccggtggccatgcagcaaagtttagcaagtacgtcg
aaagtttctgaggaatatagtgccgataacttactcaacgatttgttctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (46)   

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