KEGG   Hydra vulgaris (swiftwater hydra): 100206578
Entry
100206578         CDS       T01080                                 
Name
(RefSeq) DNA repair protein rhp26
  KO
K10841  DNA excision repair protein ERCC-6
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    100206578
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hmg03036]
    100206578
   03400 DNA repair and recombination proteins [BR:hmg03400]
    100206578
Chromosome and associated proteins [BR:hmg03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    100206578
DNA repair and recombination proteins [BR:hmg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      100206578
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD
Other DBs
NCBI-GeneID: 100206578
NCBI-ProteinID: XP_047134833
Position
6:34665339..34709960
AA seq 1202 aa
MSGEENIEPQDYSEKITSHHNEGFGFSLDITAIKNASEKKKDSEIQNLDVDIFEQEKFES
EVIRQVDKAIEASEIINKKCALNKDIKSLNEEIRIVSKELDDIEQIFENAKMGYNEDTKK
VSFSLLQKKKTKEQYLKQLKNQCVAAEEEYEKLIKPKESTDMSINTSSTIGSSLFSIKML
KEVELGQITPFDALKKNISNENKKDSLLLMRNFSNDDQEDSFEKNDIHQIEYMQKNLEKG
KIKRKRSSDDEFVLFDDESSDESIDDFDEVKSLSLNKPNTKKKCCDSVKKTTCVKDDGDF
NTYKERIKKLKIKSRLKEAIKAGEVIEDCNNFDFSEDDDVNDDAEIEDGFLLPRKLWNKL
YKYQRVGVRWLWQLHAQEVGGIVGDEMGLGKTIQVISFLAGLVYSKKGNNINNNKFGLGS
VLIVCPATVMFQWVSEFHMWWPHFRVAILHSSGTFIGSPLTLIRAISKHPGILITTYNSV
LNHKKELYKHNWQYVILDEGHKIRNPDALITLACKQFNTSHRLILTGTPMQNSLKELWSL
FDFVYPGRLGTLPVFMAEFSIPITMGGYANASSLQVQAAYKCCCILKDTITPYMIRRMKK
DVQQTLFLPTKSEQILFCKLTEEQKAIYKEFISSRDVASILNGDMKIFPGLIKLRKICNH
PDLVSLAAEVEKGKPASLDDASCYGFWKRSGKMIVVENLLRMWKHQGHRVLLFTQSKQML
DILEGFLKAAEHSYMRMDGTTSVKSRHGIVKKFHESKNIFVFLLTTRVGGLGLNLIAANR
VIIYDPDWNPSVDSQARERSWRIGQLKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVLT
NPYQRRFFKNNDLHELFTLGDVGPLESTETGSLFAGTGSEIKIRKRNRLKSEVPKVIKDV
VEKSVDKTSDLKSKNYDKNNKTHQFISNQNNQGNFSLVPDKNFAKSLHSSKKKKNYKKEK
FIVDGFCVDHVDKKEVLKKKSLPDTEKKQLLNEDDILLDLFRTSGIHSAIKHDKIELSST
SDYLLIEKEAENIAKKAVDALRASRKECKKNGLAIPTWTGGCIQKTNNKKKTLFGKKVNH
ITSNKETTASVDKGSVGITNNSVDISSSALLARMKSRSLNIEPSQNSSIVNESTELTLLK
DIQTFMLQRQSNVVSTDEITTFFQNRIDKEQNVIFKELLKQVCIFEKSLNGPGNWCLKDE
FR
NT seq 3609 nt   +upstreamnt  +downstreamnt
atgtctggtgaggaaaatattgagccacaagattattcggaaaaaatcaccagccaccat
aatgagggctttggattctctttggacataacagctattaaaaatgcttccgaaaagaaa
aaagattcagagattcaaaatttagatgttgatatctttgaacaagagaagtttgaatcc
gaagtgatccgacaagtagataaagctatcgaagcatcagaaattattaataaaaaatgt
gctttgaataaagatattaagtcattaaacgaggaaattagaattgtgtctaaagagctt
gatgatattgaacagatatttgaaaatgcgaaaatggggtataatgaagacacaaaaaaa
gtttctttttctttacttcaaaaaaagaaaaccaaggaacaatacttgaagcaactaaaa
aatcaatgtgttgctgctgaggaagagtatgaaaaactaataaaacctaaagaatcaaca
gatatgagtattaacacaagctccactattggaagttctttattctctatcaaaatgtta
aaagaagttgaacttggtcaaataactccatttgatgctttgaaaaaaaacatttctaat
gagaataaaaaagattctctacttctaatgagaaacttctccaatgatgatcaagaagat
tcctttgagaaaaatgatattcatcaaatagaatatatgcagaaaaatttagagaaaggg
aaaataaaaaggaaaagatcatcagatgatgaatttgttctatttgatgatgaatctagt
gatgaatctattgatgattttgatgaagtaaagtcattatctttaaataaaccaaacaca
aaaaaaaagtgttgtgattcagtgaaaaagactacatgtgtcaaagatgatggagatttt
aatacatataaagagagaataaaaaaattaaaaataaaaagcaggttaaaggaagccata
aaagctggagaagtaatagaagactgtaacaactttgatttttctgaagatgatgatgtt
aatgatgatgcagaaatcgaagatgggtttttattacccagaaaactttggaataaactt
tacaagtaccagagagttggagttagatggttatggcagttgcatgcacaagaggttgga
ggtattgttggagatgaaatgggacttgggaaaactattcaagtgatatcattccttgct
ggtcttgtttattctaaaaaaggcaataatataaataataacaagtttggtctgggatct
gttttgattgtctgtcctgcaacagtaatgttccaatgggtgtcagagttccacatgtgg
tggcctcattttcgtgttgcaattctacatagttctggaacttttataggaagcccattg
acattgataagagcaataagtaaacatcctggtatcttaattacaacttataatagtgta
ctgaatcacaaaaaagaactttataaacataactggcagtatgtgattcttgatgaaggt
cacaaaattcgaaaccccgatgcattaattaccctagcttgtaagcaattcaatacatcg
catagacttattttgacgggtacaccaatgcaaaatagtttaaaagaattatggtcctta
tttgattttgtgtaccctggcagacttggaacacttccagtgtttatggctgaattttct
attcctataacaatgggtggatatgcaaatgcttcatctttacaggttcaagcagcttat
aaatgctgttgcatactcaaggatacaattactccttatatgataagaagaatgaaaaaa
gatgttcaacaaacactttttctacctactaaaagcgaacagattttgttttgcaaattg
acggaagaacagaaagcaatctacaaagaatttatcagttctcgtgatgttgcttccata
ttaaatggagacatgaagatttttccgggtttaattaaactaagaaaaatatgtaatcat
cctgatttggtatcattagctgctgaagtagaaaaagggaaaccagctagtttagatgat
gctagttgttatggtttttggaaacgatcagggaaaatgattgtggttgaaaatttatta
agaatgtggaaacatcaagggcatcgcgtccttttatttacacagtcaaagcagatgttg
gatattttagaaggttttttgaaagctgctgaacattcctatatgcgtatggatggtacc
accagtgtaaaaagcagacatggtatagttaaaaagtttcatgaaagcaaaaatattttc
gtgtttttgttgacaactcgggttggaggtctaggtttaaatttgattgcagccaatcga
gttattatatatgatccagactggaacccgagtgtggatagtcaagcaagagaacggtca
tggagaatcggccagttaaaggatgttactatttatcgccttctaactactgggacaatt
gaagaaaaaatatatcacaggcaaattttcaaacagtttttaaccaatcgtgtgttgacc
aatccataccagcgacgcttttttaaaaacaatgatttgcatgaactttttactctaggt
gatgttggaccactagaatcaacagagacagggtcattatttgctggcactggttcagaa
attaaaataagaaaacgtaatcgattaaaatcagaagtaccaaaagttattaaagatgtt
gtagaaaaatcagtagataaaacatctgatctgaaatcaaaaaattatgacaaaaataat
aaaacacatcaatttatttctaatcaaaacaatcaaggtaatttttcacttgttcctgat
aaaaattttgcaaaaagtttacatagttcaaagaaaaagaaaaattataaaaaagaaaaa
tttatagtggacggtttttgtgtggatcatgttgataaaaaagaagttttaaaaaaaaaa
tctttaccagacactgaaaagaaacaactattaaatgaagatgatatcttactagatttg
tttcggacttcaggcattcacagtgctataaaacatgataaaatagagctaagcagtact
agtgattacttgttaattgaaaaggaagcagaaaacattgctaaaaaagctgttgatgct
ctaagagcatcaagaaaagaatgcaaaaaaaatgggcttgcaataccaacttggacaggg
ggctgtatacagaagacgaataataaaaaaaagacattatttgggaaaaaagttaaccat
atcacctctaataaagagactacagcctcagtagataaaggttctgttggtataaccaac
aactctgttgatatttcttctagtgccttattagctcgcatgaaaagtagaagtttaaat
attgaaccatctcaaaactctagcattgtcaatgaatctacagaacttactttactgaaa
gatattcaaacatttatgttgcaaaggcagagtaatgttgtaagtactgatgaaattaca
accttttttcaaaatcgtattgataaggaacaaaatgttatatttaaagagttgctaaaa
caagtttgcatctttgaaaagtctttaaacggtcctgggaattggtgtttaaaagatgaa
tttcgatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (61)   

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