KEGG   Hoeflea sp. IMCC20628: IMCC20628_04413
Entry
IMCC20628_04413   CDS       T03926                                 
Name
(GenBank) replication restart DNA helicase PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
hoe  Hoeflea sp. IMCC20628
Pathway
hoe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hoe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    IMCC20628_04413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hoe03400]
    IMCC20628_04413
Enzymes [BR:hoe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IMCC20628_04413
DNA repair and recombination proteins [BR:hoe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     IMCC20628_04413
SSDB
Motif
Pfam: PriA_C PriA_3primeBD DEAD PriA_CRR ResIII Helicase_C zinc-ribbons_6 AAA_30 TetR_C_6 AAA_22 AAA_16
Other DBs
NCBI-ProteinID: AKI03086
UniProt: A0A0F7PSJ9
Position
4639320..4641524
AA seq 734 aa
MIKDSRQNSGGLFPRKVVPVLIPMPAERAYSYALPEGIDASPGQIVQVPLGPRLVPGIVW
DGEADVINPDKLREIVQVFVCPPIVEPMRRFIDWVAAYTLSPPGLVARMALRAPAAFDPE
PMIDALRLTDTRPERLTVARQRVLEQAGDGLAWTRSGLAHAAGVTASVIDGLSAQGVFEP
VRLPPPPVVAAPDPDYKSAALEPGQAEVAGELRKSVAEGGFNVTLLDGVTGSGKTEVYFE
AIAEAVRQGRQVLILLPEIALTSAFLDRFHQRFGARPAEWHSELAPRMREKVWRQTAEGH
VSVVAGARSALFLPFADLGLIIVDEEHDPAFKQEERVFYNARDMAVVRARLTGIPAVLAS
ATPSIESRVNAAQGRYRHLVLPSRYAEAVLPDLKLVDMRKHGPARGGFLSPVLLKAMAAT
LERKEQSLLFLNRRGYAPLTLCRVCGHRFECPQCSSWLVEHRFRSQLQCHHCGHTEPTPN
ACPSCGTLDHLAACGPGIERIAEEAYKHFPDARTIVLSSDMAGGTRRLRIELEAIAKGEA
DIVIGTQLVAKGHNFPLMTLVGVVDADLGLSNGDPRAAERTYQLLSQVTGRAGRSGHKSL
GLIQTFQPQHPVMQALASGDPEAFYERETDERSRAHLPPFGRLASVIISAATKPEAETHA
RAMRAAAPTGTGIMVLGPAEAPLALIRGRYRFRLLVHGERGKDMQGFIRQMLAQGPKARG
SVQVQVDIDPQSFL
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgatcaaagattcgcgacagaattcaggcggactgtttccgcgcaaggttgttcccgtg
ctgattccgatgccggccgagcgcgcctattcctatgcgctgccggaaggcatcgatgcg
agccccgggcaaatcgtccaggtgccgctcgggccgcggctggtgccgggcattgtctgg
gatggcgaggcggatgtgatcaacccggacaagctgcgcgaaattgtccaggttttcgtt
tgcccgccgattgtcgagccgatgcggcgcttcatcgactgggttgcggcctacaccttg
tcgccgcccgggctggtggcgcggatggcactgagggcgccggcagcatttgatcccgaa
ccgatgatcgacgcgttgcggctgaccgatacacggccggaacggttgaccgtggcgcgg
caacgggtgctcgaacaggcaggcgacggtctggcctggacccgcagcgggctggcgcac
gccgccggcgtgaccgcgagcgtcatcgacgggttgtcggcgcaaggagtgttcgagccg
gtgagattgccgccgccgccggtggtggccgcaccggaccccgactacaagtctgcagcg
ctggagccgggccaggccgaggttgcgggtgaattgcgcaagtcggtggccgaaggcggt
ttcaatgtgacgctgcttgatggtgtgaccggatcgggcaagaccgaggtctatttcgag
gcaattgccgaagccgtgcggcagggccggcaggtgctgatcctgctgccggaaattgcg
ctgaccagcgcctttctcgaccgcttccatcagcgcttcggggcgcggccggcggaatgg
cattcggaactggcgccaaggatgcgcgaaaaggtctggcggcagacggccgaagggcat
gtcagcgttgtcgctggagcccgctcggcgctgttcctgccctttgccgatctcgggctg
atcattgtcgatgaggagcacgacccggccttcaagcaggaagaacgggtgttctacaat
gcccgcgacatggcggtggtgcgcgcccgcctcactggcatcccggctgttctggcttcg
gcgacgccgtcgatcgaatcccgcgtcaatgctgcacagggccggtaccggcatctggtt
ctgccaagccgctatgccgaagcggtgctgcctgacctgaagctggtcgacatgcgcaag
cacgggccggcgcggggcgggttcctgtcgccggtgctgctcaaggcgatggcggcgacg
ctggaacgcaaggaacagtcactgctgtttttgaaccggcgcggctatgcgccgctgacc
ttgtgccgggtctgcggtcaccgcttcgagtgcccgcaatgttcaagctggctggtcgag
caccgttttcgcagccagttgcaatgccatcattgcggccacaccgaaccgactccgaat
gcctgcccgtcctgcggcacgctggatcatctggccgcttgcggcccggggatcgagcgg
atcgccgaggaggcgtacaagcattttcccgatgcgcgcaccatcgtgctgtcgtcagac
atggccggcggcacgcggcggctcaggatcgagctcgaggcgatcgccaagggcgaggct
gatatcgtcatcggtacgcaactggtcgccaaggggcacaattttccgctgatgacgctg
gtcggtgtggttgacgccgatctgggcctgtcgaatggcgatccgcgtgctgccgaacgg
acctatcagctgctgtcgcaggtgaccggacgcgccgggcgctcgggccacaaaagcctc
ggcctgatccagacctttcaaccgcaacatccggtaatgcaggccttggcgtcaggcgat
ccggaagccttttacgagcgcgaaaccgacgagcgcagccgcgcgcatcttccgccgttc
ggccggctcgcctcggtgatcatctcggccgccaccaagccggaggccgaaacccatgca
cgggcgatgcgggcggctgcgcccacagggacgggcatcatggtgctcggaccggccgag
gcgccgctggcgttgatcaggggccgctaccgctttcggctgctggtgcatggcgaacgc
ggcaaggacatgcagggattcatccggcaaatgctggcgcaaggcccgaaggcgcgcggc
tcggtgcaggtgcaggtcgatatcgatccgcagagtttcttgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system