KEGG   Halothermothrix orenii: Hore_09820
Entry
Hore_09820        CDS       T00838                                 
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
hor  Halothermothrix orenii
Pathway
hor03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Hore_09820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hor03021]
    Hore_09820
   03400 DNA repair and recombination proteins [BR:hor03400]
    Hore_09820
Enzymes [BR:hor01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Hore_09820
Transcription machinery [BR:hor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Hore_09820
DNA repair and recombination proteins [BR:hor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Hore_09820
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ACL69738
UniProt: B8CWR9
Position
1071190..1071402
AA seq 70 aa
MSMITYPSMGKLLKKVDSPYTLVILASRRARQLNVGARGLIEEYKSKKPVSRSLEEIAAG
KVTYEIKRRN
NT seq 213 nt   +upstreamnt  +downstreamnt
ttgtcaatgataacctatccttcaatgggaaagcttttaaaaaaagtggacagtccttat
actttagttatactggcttcaaggagggcccgtcaattaaacgtgggagccaggggactt
attgaagaatataaaagtaaaaaacctgtctccaggagcctggaggagatcgcagcgggt
aaagtcacctatgaaattaaaagacgtaattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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