KEGG   Glaesserella parasuis SH03: JL26_04135
Entry
JL26_04135        CDS       T03301                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
hpas  Glaesserella parasuis SH03
Pathway
hpas00260  Glycine, serine and threonine metabolism
hpas00460  Cyanoamino acid metabolism
hpas00630  Glyoxylate and dicarboxylate metabolism
hpas00670  One carbon pool by folate
hpas00680  Methane metabolism
hpas01100  Metabolic pathways
hpas01110  Biosynthesis of secondary metabolites
hpas01120  Microbial metabolism in diverse environments
hpas01200  Carbon metabolism
hpas01230  Biosynthesis of amino acids
hpas01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:hpas00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    JL26_04135 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    JL26_04135 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JL26_04135 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    JL26_04135 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    JL26_04135 (glyA)
Enzymes [BR:hpas01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     JL26_04135 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase OKR_DC_1 Phage_capsid DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: AIK17038
Position
complement(755974..757236)
AA seq 420 aa
MLRRDMNIADYDPELWQAIQGENRRQEEHIELIASENYASPRVMEAQGSQFTNKYAEGYP
GKRYYGGCEYADIVEQLAIERAKELFGADYANVQPHSGSQANAAVYGALLMPGDTILGMS
LAHGGHLTHGASVSFSGKVYHAEQYGITAEGVIDYDALRKQAHEVKPKMIVGGFSAYSQI
VDWAKMREIADEVGAYLFVDMAHVAGLIAAGVYPSPLPHAHVVTTTTHKTLAGPRGGLIL
SNAKDEEIYKKLQNAVFPREQGGPLVHIIAAKAVCFKEALEPEYKVYQQQVVKNAKAMVE
VFKQRGYNVVSNGTENHLFLVDLVSHGLTGKAADIALGKANITVNKNAVPNDPQKPFITS
GIRVGTPSVTRRGFKEAEVRELAGWMCDVLDNIGKDNEAAVIEVTKVKVLDICKRLPVYP
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgttaagacgtgatatgaatatcgcagattatgatccagaattatggcaagctattcaa
ggcgaaaatcgtcgtcaagaagagcatattgaacttattgcttctgaaaactatgcaagt
cctcgtgtgatggaagctcagggttcacaatttaccaacaaatacgcagaaggttatcct
ggtaaacgttattatggcggctgtgaatatgcagatattgtagagcagttagcgattgaa
cgtgcgaaagagttattcggtgcagattatgccaacgtacaaccgcattcaggctctcag
gcaaatgcggcagtttatggtgcattattgatgccaggtgatactattttaggtatgagc
cttgcacatggtggacacttaactcacggtgcttcagttagtttctcaggaaaagtgtat
cacgcagaacaatacggtatcactgctgaaggggttattgactatgatgcactacgtaaa
caggctcacgaagttaaaccaaaaatgattgtaggtggcttctctgcttattctcaaatt
gttgattgggcgaaaatgcgtgaaattgcagatgaagtcggcgcttatttattcgtcgat
atggctcacgttgcaggtttaattgcagcaggtgtttatccaagcccactccctcacgca
cacgttgtaacaacgacaacacataaaactcttgcaggtcctcgtggtggtttaattctt
tccaatgcgaaagatgaagaaatctataaaaaactacaaaatgcggtattccctcgtgaa
caaggtggcccattagttcacattattgctgcaaaagcagtttgctttaaagaagcatta
gagcctgagtataaggtttatcagcaacaagtggtgaaaaatgcaaaagccatggtggaa
gtatttaaacaacgtggctataacgttgtttcaaatggtacagaaaaccacttattcctt
gttgatttagtgagccacggtttaacgggtaaagcggcagatatagctttaggtaaagca
aatattactgttaataaaaatgcagtaccgaacgatccacaaaaaccattcattacttct
ggtattcgtgttggtactccatctgtaactcgtcgtggttttaaagaggctgaagtacgg
gaacttgcaggttggatgtgcgatgtattagataacatcggtaaggataacgaagctgcg
gtaattgaagtgactaaagtgaaagttttggatatttgtaaacgtctacctgtttatcca
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (37)   

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