KEGG   Glaesserella parasuis ZJ0906: K756_10485
Entry
K756_10485        CDS       T02697                                 
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
hpaz  Glaesserella parasuis ZJ0906
Brite
KEGG Orthology (KO) [BR:hpaz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hpaz03009]
    K756_10485 (rimO)
Enzymes [BR:hpaz01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     K756_10485 (rimO)
Ribosome biogenesis [BR:hpaz03009]
 Prokaryotic type
  ribosomal protein modification factors
   K756_10485 (rimO)
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 CLP1_P Methyltransf_2 Sigma54_activat TRAM
Other DBs
NCBI-GeneID: 16167202
NCBI-ProteinID: AGO17202
UniProt: A0A806JGH7
Position
complement(2004633..2005964)
AA seq 443 aa
MSSAPNIGFVSLGCPKNLVDSERILTELRSDGYNIISSYEGADLVIVNTCGFIDSAVQES
LESIGEALEANGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEAVMKHVHKYVPKPEYN
PYVSLVPKQGIKLTPKHYAYLKISEGCDHRCTFCIIPSMRGDLDSRPIVQVLDEAKRLVD
SGVKELLIVSQDTSAYALDKKKEEGTKTVFWNGMPIKNNLIALCEQLGSMGVWVRLHYVY
PYPHVDDLIPLMAQGKLLPYLDIPLQHASPKILKAMKRPGSIDRTLERIKKWREICPDLT
LRSTFIVGFPGETEEDFQMLLDFLKEAQLDRVGCFKFSPVDGAVATEMEDQVPEEVKEER
FHRFMQLQQQISADRLQQKIGRTLSVIVDEIDEEGIIGRSMADAPEIDGVVYVDNLSGAE
VKVGQIISVTITQADEYDLWGTC
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgagttcagcaccaaatatcggctttgtgagccttggttgccctaaaaatttagtcgat
tcggaacgtattttaaccgagcttcgttcagatggttataacatcatttccagctacgaa
ggggcggatttagtgattgtcaatacttgtgggtttattgacagtgccgtgcaagagtct
ttggaaagtattggcgaagcattagaagctaacggcaaagtgattgtgacaggctgctta
ggggcaaaagagaaccaaattcgtgaagttcaccctaaagtcttggaaattacaggacca
catagctatgaagcggtgatgaaacacgttcataaatatgtgcctaaaccagaatacaac
ccttatgtcagccttgtgccaaaacaaggcattaagctaaccccgaaacattatgcttac
ctgaaaatttcggaaggttgtgatcaccgttgtacattctgtattattccatcaatgcgt
ggtgatttagacagtcgtccaatcgtgcaagtgctagatgaagcgaagcgtttagtggat
tctggtgtcaaagagctgttgattgtatcgcaggacacttccgcatacgctttagataag
aaaaaagaagaaggcaccaaaacggttttctggaacggtatgccaatcaaaaacaacttg
atcgccctctgtgaacaactaggttcaatgggtgtttgggtacgtttgcattatgtttat
ccgtatccacacgttgatgaccttattccgttgatggctcaagggaaacttctgccttat
ttggatattccattgcaacatgcaagtccaaaaatccttaaagcgatgaagcgtccagga
tctattgaccgcacattagaacgcattaaaaagtggcgtgagatttgcccagatttaacc
ctgcgttcaacatttatcgttggtttcccgggagaaacggaagaagatttccaaatgtta
ttggatttcttaaaagaagcacaattagatcgtgtcggttgttttaaattcagccctgtt
gatggtgctgttgcaactgaaatggaagatcaagttccagaagaggtgaaagaagaacgc
ttccaccgctttatgcaattacaacaacaaatttcggcagatcgtttacaacagaaaatt
ggcagaaccttgtcagtgattgtagatgaaattgatgaagaaggaataattggtcgctca
atggcggatgccccagagattgatggcgttgtctatgtagataacctttcaggtgcagaa
gtgaaagtaggtcaaattatttcagtaaccattacccaagcagatgaatatgatctgtgg
ggaacttgttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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