KEGG   Helicobacter pylori F30: HPF30_1274
Entry
HPF30_1274        CDS       T01895                                 
Symbol
res_1
Name
(GenBank) putative type III restriction enzyme
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
hpf  Helicobacter pylori F30
Brite
KEGG Orthology (KO) [BR:hpf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpf02048]
    HPF30_1274 (res_1)
Enzymes [BR:hpf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     HPF30_1274 (res_1)
Prokaryotic defense system [BR:hpf02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   HPF30_1274 (res_1)
SSDB
Motif
Pfam: ResIII DEAD SWI2_SNF2 AAA_34 Glucodextran_C
Other DBs
NCBI-ProteinID: BAJ57371
Position
complement(1350706..1353045)
AA seq 779 aa
MFEMATGSGKTLVMAGLILECYKQGYQNFIFFVNSTSILEKTKLNFTDSVSSKYLFSENI
NINDENTEIKSINHLNESQASAINIYFSTIQGLFSLFTKAKENAISIEDLKDQKLVFLAD
EAHHLNTETKKKLSNAEFSEKHNWESVVKLALEQNKDNLLLEFSATIPNEKSVKDKYKNL
KVITYTLKEFSEDKFCKNIYSLSYENKELETRFLGACVSSLYKELLAQHHNIENFKPCIL
FKSERIEDSKENQERFNAFLENLSPLDLENFFNHSHNAFFKDAKNFFDKQHYTHNLAALL
QTKFKKSVQINTNNEKELEKSMLLLNSLEDRQNPKRVIFSVDKLNEGWDVLNLFDIVRLK
NKASQKDTTKDAQLIGRGARYYPFSYNDLKSSSIEFYQRKFDLFNPLSALERLDYHAIYD
SEFIAKLKKELQDLGLEFANEKQTIPLTPTKRFKCYYASNTKDKNKNLFNKDYTDHVKVK
LQSLHVSLFVFGVREKKVDFKEENKGDKTYYIPHTLDKIPINYFLKALNLKNLDFKTLKK
AFKKHAFSNKVGFIERYISPLKTNFHKNQKFDDNKILLKLAVYIIENLKDTLLKEQDKYD
VSALELKEFETHNRSLSASEFEKDIPLYEWLLFKDMRKLDSDLEREFLDFINKNKEVLDK
KFKEWCVLRNDRFTELKVFCNIENSPYYAQGFEPDFILFAQTHSDEFLGFTCYMEAKGEH
LEHSNAWKEEFLEMLENATLKSHNKKLDLKGLPFFTLKNSVVNSEFTTAFNQIFKDQKC
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgtttgaaatggcaaccggtagcggtaaaaccttagtgatggcgggtttgattttagaa
tgctacaagcaaggctatcaaaactttatcttttttgtgaacagcaccagcattttagaa
aaaaccaagcttaattttacagacagcgtctcatcaaaatacctttttagtgaaaatatc
aatatcaatgatgaaaacacagaaattaaaagcatcaatcatttaaacgagagccaagca
agcgctatcaacatttattttagcaccattcaaggattgttttcattattcactaaggct
aaagaaaacgctatcagcatagaggatttaaaagatcaaaaattggtttttttagcggat
gaagcgcaccatttaaacacagagactaaaaagaaattaagcaatgcagaatttagtgaa
aaacacaactgggaaagcgttgtgaaattagcgctagaacaaaataaagacaatttattg
ctggaatttagcgccactatccctaatgaaaaaagcgttaaagacaaatataaaaaccta
aaggtgatcacttacaccttaaaagaatttagcgaggataaattttgcaaaaacatctac
tccctttcttatgaaaataaagaattagaaacgcgctttttaggggcatgcgtttcaagt
ttgtataaagaattattagcccaacaccacaatattgaaaactttaaaccatgcattttg
tttaaaagcgagaggattgaagatagcaaagaaaatcaagagcgcttcaacgccttttta
gaaaatttaagccctttagatttagaaaattttttcaatcacagccataacgcttttttt
aaggacgctaaaaacttttttgacaagcaacattacacccacaaccttgccgcattattg
caaacgaaattcaaaaaaagcgttcagattaacaccaacaacgaaaaagaattagaaaag
agcatgcttttattgaactccctagaagacagacaaaaccctaaaagagtgatttttagc
gtggataagctcaatgaaggctgggatgtgttgaatttgtttgacattgtcaggcttaaa
aataaagcgagccaaaaagacaccactaaagacgcccagctcatagggcgaggagcgaga
tactacccctttagctataacgatttaaaatcaagtagcatagagttttaccaacgcaag
tttgatctttttaaccccttaagcgcgctagaaaggttagactaccatgccatttatgac
agcgagtttatcgctaaattaaaaaaagagttacaagatttaggattagaatttgcaaat
gaaaaacagactatccctttaacacccaccaagcgtttcaaatgctactatgcgagcaac
acaaaagacaaaaataaaaacctattcaataaagactatacagaccatgttaaagtcaag
ctccaaagtttgcatgtctctttatttgtttttggcgtgcgtgaaaagaaagtggatttt
aaagaagaaaataagggcgataaaacttattatataccccataccttagataaaatccct
ataaactattttttaaaagcccttaatttaaaaaacctggatttcaaaacgcttaaaaaa
gcctttaaaaaacatgcctttagcaataaagtgggatttatagagcgctatatttctcca
ttaaaaacaaactttcataaaaaccaaaagtttgacgacaacaaaatacttttaaaactc
gctgtttatatcattgaaaacttaaaagacacgcttttaaaagagcaagataaatacgat
gtgagcgcgttagaattaaaagaatttgaaacgcataacagaagccttagcgctagtgaa
tttgaaaaagacattcccctttatgaatggctgctttttaaggacatgagaaaactagac
agcgatttagaaagggagtttttagatttcatcaacaaaaataaagaggttttagacaag
aaattcaaagaatggtgcgttttaaggaatgatcgtttcactgaattaaaagttttttgc
aatatagaaaatagcccttattacgcacaaggttttgagccggattttatcctttttgcc
caaacgcatagcgatgaatttttaggcttcacttgttatatggaagctaaaggcgaacat
ttagagcattctaacgcttggaaagaagaatttttagaaatgctagaaaacgccacgctt
aaaagtcataacaaaaaattagatttaaaaggcttgccgtttttcacgctcaaaaatagc
gtagtaaatagcgaatttacaactgctttcaatcaaatctttaaggatcaaaaatgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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