KEGG   Helicobacter pylori Lithuania75: HPLT_04155
Entry
HPLT_04155        CDS       T01896                                 
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
hph  Helicobacter pylori Lithuania75
Pathway
hph03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hph00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HPLT_04155 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hph03400]
    HPLT_04155 (uvrC)
DNA repair and recombination proteins [BR:hph03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HPLT_04155 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH_2
Other DBs
NCBI-ProteinID: ADU83239
UniProt: E8QPV7
Position
829060..830844
AA seq 594 aa
MADLLSSLKNLSNSSGVYQYFDKNRQLLYIGKAKNLKKRIKSYFSIRNNEIVPNHRASLR
IQMMVKQIAFLETILVENEQDALILENSLIKQLKPKYNILLRDDKTYPYIYMDFSTDFPI
PLITRKILKQPGVKYFGPFTSGAKDILDSLYELLPLVQKKNCIKDKKACMFYQIERCKAP
CEDKITKEEYLKIAKECLEMIENKDKLIKELELKMERLSNNLRFEEALIYRDRIAKIQKI
APFTCMDLAKLYDLDIFAFYGASNKAVLVKMFMRGGKIISSAFEKIHSLNGFDTDEAMKQ
AIINHYQSHLPLIPEQILLNACSNEALKELQEFISHQYSKKIALSIPKKGDKLALIEIAM
KNAQEIFSQEKTSNEDLILEEARSLFNLECVPYRVEIFDTSHHSNSQCVGGMVVYENNAF
QKNSYRRYHLKGSNEYTQMSELLTRRALDFAKEPPPNLWVIDGGRAQLNIALEILKSSGS
FVEVIAISKEKRDSKAYRSKGGAKDIIHTPSDTFKLLPSDKRLQWVQKLRDESHRYAINF
HRSTKLKNMKQIALLKEKGIGEASVKKLLDYFGSFEAIEKASEQEKNAVLKKRN
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggctgatttattgtccagtttgaaaaacctttctaatagcagtggggtgtatcaatat
tttgataaaaaccgccaattactctatatcggtaaagcaaaaaacttaaaaaagcgcatc
aaaagctatttttctatccgtaataatgaaatcgtgcccaatcatcgtgcaagcttacgc
atccaaatgatggtcaaacaaatcgcttttttagaaacgattttagtggaaaacgagcaa
gacgctttgattttagaaaattctttgatcaagcagctcaagcccaaatacaacattctt
ttaagagacgataaaacttacccttatatttatatggatttttccactgatttccctatc
cctttaatcacacgaaaaattttaaaacagcctggcgttaaatattttggcccttttacg
agcggggctaaagatattttagacagcttgtatgaattgctcccgttggttcaaaagaaa
aattgcatcaaggataaaaaggcatgcatgttttatcaaatagagcgttgtaaagcccca
tgcgaggataaaatcaccaaagaagagtatttaaaaatcgctaaagaatgtttagaaatg
attgaaaataaagacaagctcatcaaagagcttgaattgaaaatggagcgcctttctaat
aacttgcgttttgaagaagctctcatttacagggacaggattgcaaaaatccaaaaaatc
gcccctttcacttgcatggatttagccaaactctatgatttggatatttttgctttttat
ggcgcaagcaataaggcggtgttagtgaaaatgtttatgcgtgggggtaaaatcatttct
tctgcgtttgaaaaaatccactcccttaatgggtttgacaccgatgaagcgatgaaacaa
gccattatcaaccattaccaatcgcatttgcctttaataccagaacagattttattgaac
gcttgctctaacgaagcgcttaaagaattgcaagaatttatctctcatcaatattctaaa
aaaatcgctcttagcattcctaaaaagggcgataagctcgctttaatagagatcgctatg
aaaaacgctcaagagatttttagccaagaaaaaacctctaatgaagatctgattttagaa
gaagcgcgatcgcttttcaatttagagtgcgtgccttatagggtggaaatctttgacaca
agccaccattcaaacagccaatgcgtggggggaatggtcgtgtatgaaaacaacgccttc
caaaaaaattcttatcggcgctatcatttaaaaggctctaatgaatacactcaaatgagc
gaattgctcaccagaagggctttagactttgctaaagagccaccgcctaatttgtgggtg
atagatggagggagggcgcaattaaacatcgctttagaaattttaaaaagcagcgggagt
tttgtagaagtgatcgctatttctaaagaaaaaagggattctaaggcttatcgttctaaa
gggggcgctaaagacattatccatacgcctagcgatacttttaaattgctccctagcgac
aaacgcttgcaatgggtgcaaaaattgcgcgatgaaagccaccggtatgcgataaacttc
cacagatccactaaacttaaaaacatgaaacaaatcgctcttttaaaagaaaagggcata
ggagaagccagcgtgaaaaaattattggattattttgggagttttgaagcgatagaaaaa
gcgagcgagcaggaaaaaaacgccgttttgaaaaaacgaaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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