KEGG   Helicobacter pylori 908: hp908_1293
Entry
hp908_1293        CDS       T01893                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
hpi  Helicobacter pylori 908
Pathway
hpi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hpi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    hp908_1293 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hpi03021]
    hp908_1293 (rpoA)
   03400 DNA repair and recombination proteins [BR:hpi03400]
    hp908_1293 (rpoA)
Enzymes [BR:hpi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     hp908_1293 (rpoA)
Transcription machinery [BR:hpi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     hp908_1293 (rpoA)
DNA repair and recombination proteins [BR:hpi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      hp908_1293 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Enkurin Myb_DNA-bind_4
Other DBs
NCBI-ProteinID: ADN80414
Position
complement(1263792..1264826)
AA seq 344 aa
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMEIR
ARDLNSEQIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMPEGYMPLDGSF
TPIKNVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSPEQRESLKKRLEKLEDKGGND
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggcaatcgggttaagatttctctagctccgtttgagtttggttacgctgttacgctcgct
caccctattagaagactcttgcttttaagctctgtggggtatgctcctgtaggtttaaag
atcgaaggcgtccatcatgagtttgactctttaagaggggttactgaagacgtgtcgctt
tttatcatgaatttaaagaatatccgctttatagctaaggcgttagtggggcaggatagt
tctttagaaaaccaatcggttgtggtggattattcttttaaagggcctatggagattagg
gctagggatttgaattctgagcagatagaaatcgtcaatccggaaatgcccctagccacg
atcaacgaagacgctcaattgaatttttcgctcatcatttataagggaatggggtatgtc
ccaagcgaaaacacaagggaattgatgcctgaaggttacatgccgctagacggctctttc
acgccgattaaaaatgtggtttatgagattgaaaatgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacggacgggcagattgacccttataaagcgttt
ttatcagcggtgaaagtgatgagtaagcaactgggtgtttttggcgaaagacccattgct
aacacggagtattcaggcgattacgctcaaagagatgacgctaaagacttgagcgctaag
attgaaagcatgaatttgagcgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaattggttttgatgagcgaagaagagcttaagggcgtgaaaaacatgggc
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattgagccctgaacaaagagagagtttaaagaaaagattagaaaaattagaagataaa
ggaggtaacgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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