KEGG   Helicobacter pylori B8: HPB8_1
Entry
HPB8_1            CDS       T01262                                 
Symbol
dnaA
Name
(GenBank) chromosomal replication initiator protein DnaA
  KO
K02313  chromosomal replication initiator protein
Organism
hpl  Helicobacter pylori B8
Pathway
hpl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hpl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HPB8_1 (dnaA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpl03032]
    HPB8_1 (dnaA)
   03036 Chromosome and associated proteins [BR:hpl03036]
    HPB8_1 (dnaA)
DNA replication proteins [BR:hpl03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HPB8_1 (dnaA)
Chromosome and associated proteins [BR:hpl03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    HPB8_1 (dnaA)
SSDB
Motif
Pfam: Bac_DnaA Bac_DnaA_C IstB_IS21 ATPase_2 DnaA_N AAA_22 AAA nSTAND3 Viral_helicase1 T2SSE AAA_19 ResIII SRP54 Sigma54_activat AAA_7 AAA_14 AAA_16 AAA_28 RuvB_N KAP_NTPase TsaE RNA_helicase
Other DBs
NCBI-ProteinID: CBI65558
UniProt: D7FBK1
Position
154..1527
AA seq 457 aa
MDTNNNIEKEILALVKQNPKVSLIEYENYFSQLKYNPNASKSDIAFFYAPNQVLCTTITA
KYGALLKEILSQNKVGMHLAHSVDVRIEVAPKIQISAQSNINYKAIKTSVKDSYTFENFV
VGSCNNTVYEIAKKVAQSDTPPYNPVLFYGGTGLGKTHILNAIGNHALEKHKKVVLVTSE
DFLTDFLKHLDNKTMDSFKAKYRHCDFFLLDDAQFLQGKPKLEEEFFHTFNELHANSKQI
VLISDRSPKNIAGLEDRLKSRFEWGITAKVMPPDLETKLSIVKQKCQLNQITLPEEVMEY
IAQHISDNIRQMEGAIIKISVNANLMNAPIDLNLAKTVLEDLQKDHAEGSSLENILLAVA
QSLNLKSSEIKVSSRQKNVALARKLVVYFARLYTPNPTLSLAQFLDLKDHSSISKMYSSV
KKMLEEEKSPFISSLREEIKNRLNELNDKKTAFNSSE
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggataccaacaacaatattgaaaaagaaatcttggcgctagtcaaacaaaatcctaaa
gttagtctcatagaatatgaaaattactttagccaactcaaatacaaccctaacgcgagc
aagagcgatattgcctttttttatgcccccaaccaagtcttatgcaccacgattacggct
aaatacggcgcgttgcttaaagaaattttaagccagaataaagtcggcatgcatttagcc
catagcgtggacgtgcgtattgaagtagcgcctaaaatccaaattagcgcccaatctaat
atcaattacaaagccataaaaacgagcgtcaaagactcttacacttttgaaaattttgtc
gtaggctcatgcaataacaccgtttatgaaatcgctaaaaaagtcgcccaaagcgatacc
cccccttataacccggtgcttttttatggcggcacagggttaggcaaaacgcacatttta
aacgctatcggtaaccatgccctagaaaagcataaaaaagtcgtgttagtcacttcagaa
gattttttgacagacttcttaaagcatttagacaacaaaaccatggattcttttaaagca
aaataccgccattgcgactttttcttgttagatgacgctcaatttttgcaaggaaaaccc
aagctagaagaagaatttttccacacttttaacgaattgcacgccaacagcaaacaaatc
gtattgatttcagaccgatcgcctaaaaacatcgccggcttagaagatcgcttaaaatcg
cgctttgaatgggggataaccgccaaagtcatgccccctgatttagaaaccaaactttcc
attgtcaaacaaaaatgccaactcaatcaaatcactttgcctgaagaagtgatggaatac
atcgcccaacacatcagcgacaatatccgccaaatggaaggtgcgatcattaaaatcagc
gtgaacgcgaacttaatgaacgctcccattgatttgaacctcgctaaaaccgttttagaa
gatttgcaaaaagatcatgctgaaggctcaagcttggaaaatattttgctcgctgtcgcg
caaagcttaaatctcaaatccagcgaaatcaaagtctcttcgcgccaaaaaaatgtcgct
ttggcgagaaaattagtcgtgtatttcgccaggctttatacccctaaccccacgctttca
ctcgctcaatttttggatttaaaggatcattcaagcatttctaaaatgtattctagcgtt
aaaaaaatgcttgaagaagaaaaaagcccttttatctcaagccttagagaagaaatcaaa
aaccgcctgaacgaattgaatgacaaaaaaaccgctttcaattcaagtgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (31)   

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