KEGG   Helicobacter pylori SJM180: HPSJM_03625
Entry
HPSJM_03625       CDS       T01323                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
hpm  Helicobacter pylori SJM180
Pathway
hpm03030  DNA replication
hpm03430  Mismatch repair
hpm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPSJM_03625
   03430 Mismatch repair
    HPSJM_03625
   03440 Homologous recombination
    HPSJM_03625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpm03032]
    HPSJM_03625
   03400 DNA repair and recombination proteins [BR:hpm03400]
    HPSJM_03625
Enzymes [BR:hpm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HPSJM_03625
DNA replication proteins [BR:hpm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HPSJM_03625
DNA repair and recombination proteins [BR:hpm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HPSJM_03625
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 RuvB_N AAA_5 AAA_14 DNA_pol3_gamma3 AAA_30 DEAD AAA_assoc_2 TIP49 AAA_19
Other DBs
NCBI-ProteinID: ADO02317
UniProt: E1PZH6
Position
complement(739696..741465)
AA seq 589 aa
MQVLALKYRPKHFSELVGQESVAKTLSLALNNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCETGPKAVPCDTCTQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYESSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLQERYAILENYETESVLEEMMLFLKAKLLSPDTYSILLI
ERFFKIIMSSLSLLKEGANASFVLLLLKMKFKEALKLKALDDAIVELEQTPFNQNPSISY
NDSKQEPKSTEKIEQAERIEGTEKIASAEAPQTPMLSAKDRIFHNLFKQVQTLVYERNYE
LGAVFEKNIRFIDFDSQTKTLTWESLAADKDKELLRERFKIVKSIVDGIFGKGENIKIAL
KNHLENKSTLETQEVKEFKFPPLKPKPTTETTAEMQENDTKEAVGKALQTKENDTKEVQE
KEIKENETKETKEAKPKEAPTALQEFMANHSELIEEIKSEFEIKSVELL
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctaaacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcaggcaaaaccagctcttctaggatttttgctagggcttta
atgtgcgaaacagggccaaaggctgtgccttgcgatacttgcacccaatgccagagcgct
ttaaacaaccaccatatagatattatagaaatggatggggcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgctttgaaattg
cccgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagttatgaaagtagcgcg
ttagaaaaactggctcacagcgggcaagggagtttgagggacacgatcactcttttagag
caagccatcaattattgcgataacgctatcacagaaagcaaggtggctgaaatgttagga
gcgattgacaggagcgttttagaagattttttccaaagtttaatcaaccaagatgaagcg
cgattacaggagcgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgatacttattccattcttttaata
gagcgcttttttaaaatcattatgagcagtttgagccttttaaaagaaggggcaaatgct
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttaaaactcaaagcccta
gatgatgcgattgtagaattagagcaaacccctttcaatcaaaaccctagcataagctat
aacgactctaaacaagaacccaaaagcacagaaaaaatagaacaagcagaaaggatagag
ggaacagaaaaaatagcgagcgcagaagccccacaaactcccatgctttcagctaaagat
cgcattttccacaaccttttcaagcaagttcaaacattggtttatgagcgcaactacgaa
ttaggggcggtgtttgaaaaaaatatccgtttcattgattttgacagccagactaaaacc
ttgacttgggagtctttagccgctgataaggataaagagcttttaagagaacgatttaaa
atcgtgaaaagtatcgttgatgggatttttggcaagggcgaaaatatcaaaatcgcttta
aaaaatcatttggaaaataaaagcactctagaaactcaagaggttaaagagtttaaattc
ccccccttaaagcccaaaccaaccaccgaaacgacggctgaaatgcaagaaaacgatact
aaagaagcggttggaaaagcgcttcaaacgaaagaaaacgacactaaagaggttcaagaa
aaagagattaaagaaaacgaaactaaagagactaaagaagccaaacccaaagaagcccca
acagcgttgcaagaatttatggctaaccactctgagctgattgaagaaattaagagcgag
tttgaaatcaaaagcgtggaattgttatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system