KEGG   Helicobacter pylori 35A: HMPREF4655_20424
Entry
HMPREF4655_20424  CDS       T01892                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
hpo  Helicobacter pylori 35A
Pathway
hpo00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:hpo00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HMPREF4655_20424 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hpo01007]
    HMPREF4655_20424 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpo03016]
    HMPREF4655_20424 (lysS)
Enzymes [BR:hpo01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     HMPREF4655_20424 (lysS)
Amino acid related enzymes [BR:hpo01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   HMPREF4655_20424 (lysS)
Transfer RNA biogenesis [BR:hpo03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    HMPREF4655_20424 (lysS)
 Prokaryotic type
   Other AARSs
    HMPREF4655_20424 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: ADU40563
Position
409783..411288
AA seq 501 aa
MFSNQYIQQRIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKDLEEPKDKEKCESI
VGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFAT
KTGELSVHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIV
SSVRKFFETEGFLEVETPMMHPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGG
FEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKI
IYNDMEVDFNQTSVISYLDALETIGGISRDILEKEDRLLAYLLEQGIKVEPNLTYGKLLA
EAFDHFVEHQLINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDP
LDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIK
DVILFPAMRPVKNDFNVESEE
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgttttccaaccaatacatccaacaacgcatccataaagccaacagcttgagggaagaa
gggaaaaacccttataaaaatggcttgaaacgaagccttacaaacgccgcttttttagaa
aaatacgcctatgttaaggatttagaagagcctaaagacaaggaaaaatgcgagagtatt
gtagggagggtcaagcttttgcgtttaatgggtaaggcatgttttattaaaattgaagat
gaaagcgcgattttgcaagcttatgtttcgcaaaatgaattgaatgatgagtttaaaagc
ctgaaaaagcatttagaagtgggcgatattgtgttggtgaaaggtttcccttttgctacc
aaaaccggtgaattaagcgttcatgccctagaatttcatattttaagcaaaaccattgtg
cctttacctgaaaaattccatggactgagcgatatagaattacgttaccgccagcgctat
ttggatttgatagtcaatcctagcgttaaagatgtgtttaaaaaacgcagtttgattgtt
tctagcgtgcggaaattctttgaaacggaaggatttttagaagtggaaacccccatgatg
caccccattcctggcggggcgaacgcaaggccttttatcacttaccataacgctttagaa
attgaaaggtatttaagaatcgctccagaattatacctcaaacgcttgattgtggggggt
tttgaagcggtgtttgaaatcaatcgtaatttcaggaatgagggcatggatcacagccat
aaccccgaatttacgatgattgagttttattgggcgtatcacacttatgaagatttgatc
gaactcagtaagaggctatttgactacttgctaaaaactttgaacttaccttcaaaaatc
atttataacgatatggaagtggattttaaccaaacgagcgtgatttcctatttggacgct
ttagaaacaatagggggcattagtagggatattttagaaaaagaagacaggcttttggct
tatttgttagagcaaggcattaaagtagagccaaatctcacttatggtaaattgctcgct
gaagcgtttgatcattttgtagagcaccaactcattaaccccacttttgtaacccaatac
cccattgagattagccccctagccagacgcaacgatagtaaccctaatattgctgacagg
tttgaattgtttattgcagggaaagaaatcgctaacggctttagcgagttgaacgatcct
ttagatcaattagaacgctttaaaaatcaagtggctgaaaaagaaaaaggcgatgaagaa
gcccaatacatggatgaagattatgtgtgggcgttagcccatggaatgccccccactgca
gggcaaggcataggcattgatagattagtgatgctactcactggggctaaaagcattaaa
gatgtgattttattcccagcgatgcgtcctgttaaaaacgattttaatgtggagagtgaa
gaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system