KEGG T01892: HMPREF4655

Helicobacter pylori 35A: HMPREF4655_21342

Entry

HMPREF4655_21342  CDS       T01892

Symbol

valS

Name

(GenBank) valine--tRNA ligase

K01873

valyl-tRNA synthetase [EC:6.1.1.9]

Organism

hpo Helicobacter pylori 35A

Pathway

hpo00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:hpo00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HMPREF4655_21342 (valS)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hpo01007]
    HMPREF4655_21342 (valS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpo03016]
    HMPREF4655_21342 (valS)
Enzymes [BR:hpo01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     HMPREF4655_21342 (valS)
Amino acid related enzymes [BR:hpo01007]
Aminoacyl-tRNA synthetase
  Class I (U)
   HMPREF4655_21342 (valS)
Transfer RNA biogenesis [BR:hpo03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    HMPREF4655_21342 (valS)
Prokaryotic type
    HMPREF4655_21342 (valS)

SSDB

Motif

Pfam:

tRNA-synt_1 Anticodon_1 tRNA-synt_1g Val_tRNA-synt_C tRNA-synt_1_2 tRNA-synt_1e tRNA-synt_1f tRNA-synt_1c DUF6782

Other DBs

NCBI-ProteinID:

ADU41422

Position

complement(1348065..1350683)

AA seq 872 aa
MKQEPTTYQPEEIEKKIYEICSHRGYFEIDGNEAIQEKNKRFCLMMPPPNVTGILHIGHA
LTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQNVVEKQLLNQGIKKEDLGREAFVQKV
WEWKEKSGGAILEQMKHLGVSAAFSRTRFTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVN
WCTKDGALSDIEVEYEERKGALYYIRYYLENQKDYLVVATTRPETLFGDSALMVNPNDER
YKHLVGQKVILPLINRKIPIIADSHVEMEFGTGCVKVTPGHDFNDYEVGKRHHLETIKIF
DEKGILNVHCGEFENLERLKARDKVVERLKENALLEKIEEHTHQVGHCYRCHNVVEPYVS
KQWFVKPEIAQSSIEKIQQGLARFYPSNWINNYNAWMRELRPWCISRQLFWGHQIPVFTC
ENNHQFVSLDTPLSCPTCKSEKLEQDKDVLDTWFSSGLWAFSTLGWGQEKSDLFNENDLK
DFYPNTTLITGFDILFFWVARMLFCSESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVI
DPLEMIEKYGADSLRFTLANLCATGRDIKLSTAHLENNKNFANKIFNAVSYLKLKQEAFK
DKERLSEYQTPLGRYAKSRLNFVTKEARNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK
VENGAIDELGSVLKEALKLLHPFMPFISESLYHKLSNTQLENTESIMVMPYPKDLVQDEK
LEHEFEVIKDCIVSLRRLKIMLETPPIVLKEASVGLREAIENTERLQTYAQKLARLEKVS
VISSKPLKSVSDVGEFCQTHANLENLDLSPLVARLKKQLEKLEKEKLKLNLHNENFVKNA
PKSVLEKAKESLKTLLEKESKIKQELDLLEQP

NT seq 2619 nt +upstreamnt +downstreamnt
atgaaacaagaacccaccacttaccaaccagaagagatagaaaaaaagatttatgaaatt
tgttctcatagggggtattttgaaattgatggcaatgaagcgatccaagaaaaaaacaaa
cgattttgcttgatgatgccccctcctaatgtgactggcatcttacacatagggcatgcc
ctaactttaagtttgcaagatattttagcgcgctacaaacgcatggatgggtataagact
ttgtatcagccggggttggatcacgccggtattgcgacacaaaatgtcgtagaaaagcaa
cttttaaatcaagggattaaaaaagaagatctagggcgtgaagcgttcgttcaaaaagtg
tgggaatggaaagaaaagagtgggggagcgattttagagcaaatgaagcatttaggcgtg
agcgcggctttttctaggactcgtttcacgatggataagggcttgcaaagagcggttaaa
ttggcgtttttgaaatggtatgaaaaaggcctcattattcaagataattacatggtgaat
tggtgcactaaagatggggcgttgagcgatattgaagtggagtatgaagagcgtaagggg
gcgttgtattatattagatattatttagaaaatcaaaaagattatttagtggtggctacc
acacgccctgaaaccttgtttggcgatagtgctcttatggtcaatcctaatgatgagaga
tacaagcatttagtggggcaaaaagtgatcttgcctttaattaatcgcaagatccctatt
atcgctgattcgcatgtggaaatggagtttggcacagggtgtgtgaaggttacccctggg
catgattttaacgattatgaagtgggcaaacgccaccatttggaaacgattaaaatcttt
gatgaaaaggggattttaaacgtgcattgtggggaatttgaaaatttagaacgattaaaa
gccagagataaggtcgtagaaagattaaaagaaaacgccttactagaaaagatagaagag
cacacgcatcaagtggggcattgctatcgctgtcataatgtggtagagccttatgtgtct
aagcaatggtttgtcaagcctgaaatcgctcaaagttctattgaaaaaatccaacagggt
ttagcgcgattctacccttctaattggatcaataattataacgcttggatgagggaatta
cgcccttggtgtatcagcaggcaattgttttgggggcatcaaataccggtatttacttgt
gaaaataaccaccagtttgtaagcctagacacccccttaagctgccctacttgtaagagt
gaaaaactagaacaagataaagatgtgctagacacatggtttagttcagggctatgggcg
ttctctactttggggtgggggcaagaaaaaagcgatttgtttaatgaaaacgatttgaaa
gatttctaccctaacacaacgctcattactgggtttgacatcctctttttttgggtggct
aggatgcttttttgcagtgaatcgcttttaggcgaattgccctttaaagatatttacttg
cacgccttagtgagagatgaaaaaggtgaaaaaatgagcaaatctaaaggtaatgtgatc
gatcctttagaaatgatagaaaaatacggcgcggatagcttgcgtttcactttagccaat
ttgtgcgctacgggtagagatattaagctttctactgcgcatttagaaaacaacaagaat
tttgccaacaagattttcaatgcggtgagttatttgaaactcaaacaagaagcttttaaa
gataaagagcgtttgagtgaataccaaacgcctttggggcgttacgcgaaatcgcgctta
aattttgtgactaaagaggctcgtaacgctttagataattatcgttttaatgatgcgacg
actttgttataccgctttttgtggggggaattttgcgattggttcattgaattttctaaa
gtggaaaatggagcgatagacgaattagggagcgtgttaaaagaggctttaaaactcttg
caccctttcatgccctttatcagcgagtctttataccacaagctcagtaacactcaacta
gaaaacactgaatctatcatggtcatgccttaccctaaagatttagtgcaagatgaaaaa
ttagagcatgaatttgaagtgattaaagattgcattgtgtctttaaggcgtttaaaaatc
atgctagaaaccccaccgattgttttaaaagaagcgagcgtgggattaagggaagccata
gaaaacacagagcgtttgcaaacttacgcccaaaaattagcgagattagaaaaagtcagc
gtgatcagttctaagcctttaaaaagcgtgagcgatgtgggggaattttgccaaactcat
gcgaatttagaaaatcttgatttaagcccgcttgttgcgcgtttaaaaaagcagttagaa
aaactggaaaaagaaaaattaaaactcaatttgcacaatgaaaattttgtcaaaaacgcg
cctaaaagcgtgctagaaaaagctaaagagagtttaaaaacgcttttagaaaaagaaagt
aaaattaagcaagaattggatttgttagaacagccataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

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