KEGG   Helicobacter pylori Shi470: HPSH_05040
Entry
HPSH_05040        CDS       T00742                                 
Name
(GenBank) hypothetical protein
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
hps  Helicobacter pylori Shi470
Brite
KEGG Orthology (KO) [BR:hps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hps03009]
    HPSH_05040
Enzymes [BR:hps01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     HPSH_05040
Ribosome biogenesis [BR:hps03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HPSH_05040
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ACD48434
Position
complement(997060..997788)
AA seq 242 aa
MEKAYKILSVQENISHKKAKALIDLGLVSVGGKKLMVARKELPKNTHFSVQKVEKPSVIF
EDENILALFKPPFIESYDLVSFFKGWVLLHRLDKETSGVILLVKENSEFHLKAKKAFKDR
ALKKEYLALAQGIIEEEQEINAPILTIKTTKAFSKISKKGQEAVTIITPLKIINKKTLLK
VGIKTGRTHQIRVHLKHINHPIIGDTLYNNEPGSAKRLMLHAHKIALLGYEFEAIPPKEF
EF
NT seq 729 nt   +upstreamnt  +downstreamnt
atggaaaaagcttataaaatattgagcgttcaagaaaacatttcgcacaaaaaagccaaa
gctttgattgatttggggttagtgagtgtgggggggaaaaaattgatggttgccagaaaa
gaattacccaaaaacacgcattttagcgtccaaaaggttgaaaagcccagcgtgattttt
gaagatgaaaacattctagccctttttaaacccccctttatagagagttatgatttagtt
tcttttttcaaaggttgggttttgttgcaccgcttggataaagaaacaagcggggtgatt
ttattggtgaaagaaaattcagaattccacttaaaagctaaaaaggcttttaaagacagg
gcgcttaaaaaggagtatttagcgctcgctcaaggcattatagaagaagagcaagaaatt
aacgctcccattcttacgattaaaaccactaaagctttcagtaaaatctctaaaaaaggg
caagaagcggttacgataatcacgcctttaaaaatcatcaacaaaaaaacccttttaaaa
gtgggaatcaaaaccggaagaacgcatcaaatcagagtccatttaaagcacatcaaccac
cccattataggcgatacgctttataataatgagccaggttcagccaaacgcttgatgctc
catgcgcataaaatcgcgctactagggtatgaatttgaagcgatcccccctaaagaattt
gaattttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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