KEGG   Helicobacter pylori v225d: HPV225_1070
Entry
HPV225_1070       CDS       T01899                                 
Symbol
rpsA
Name
(GenBank) ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
hpv  Helicobacter pylori v225d
Pathway
hpv03010  Ribosome
Brite
KEGG Orthology (KO) [BR:hpv00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    HPV225_1070 (rpsA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:hpv03011]
    HPV225_1070 (rpsA)
Ribosome [BR:hpv03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    HPV225_1070 (rpsA)
  Bacteria
    HPV225_1070 (rpsA)
SSDB
Motif
Pfam: S1 Spt6_S1 S1_2 CsrA DUF2110 RuvA_N CBFD_NFYB_HMF
Other DBs
NCBI-ProteinID: ADI35118
Position
1056483..1058141
AA seq 552 aa
MSKIPDDQNFNDEEEDFAKLLEKEETLEKGTIKEGLIVSINEDDGYAMVSVGGKTEGRLA
LSEIADEKGQLLYQKNDPIIVHVSEKGEHPSVSYKKAISQQKIQDKIEELGENYENAIIE
GKIVGKNKGGYIVESQGVEYFLSRSRSSLKNDANHIGKRIKACIIHVDKENHSINISRKR
FFEVNDKRQLEVSKGLLEATEPVLGVVRQITPFGIFVEVKGVEGLVHYSEISHKGPVNPE
KYYKEGDEVYVKAIAYDEEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIENYGA
FVDIGNDIEGFLHVSEISWDKNVSHPSNYLSVGQEIDVKIIDIDPKNRRLRVSLKQLTNR
PFDVFESKHQVGDVLEGKVATLTDFGAFLNLGGVDGLLHNHDAFWDKDKKCKDHYKIGDV
IKVKILKINKKDRKISLSAKHLVTSPTEEFAQKHKTDSVIQGKVVSIKDFGVFINADGID
VLIKNEDLNPLKKDEIKIGQEITCVVVAIEKSNNKVRASVHRLERKKEKEELQAFNTSDD
KMTLGDILKEKL
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgagcaagataccagatgatcagaactttaatgacgaggaggaagacttcgcaaaactc
ttagaaaaagaagaaactctagaaaaaggcactatcaaagaaggtttaatcgtttccatc
aatgaggatgatggttatgccatggtgagcgtgggcggtaagacagaaggccgtttggct
ttgagcgagatcgccgatgaaaaggggcagttgctgtatcaaaaaaatgaccccattatc
gtgcatgtgtccgaaaaaggtgaacaccctagcgtttcctacaaaaaggccatttcccaa
caaaagattcaagataaaattgaagaattaggcgaaaactatgaaaacgccattattgaa
ggcaaaattgtaggcaagaataaggggggctatatcgtggagtctcaaggcgtggagtat
ttcctctcccgctcgcgctcttctttaaagaatgacgcaaaccatatcggcaaacgcatt
aaagcatgcatcattcatgtggataaggaaaaccattctatcaatatttctcgcaaacga
ttctttgaagtcaatgacaaacgacagcttgaagtttctaaaggattgttagaagctaca
gagccggtgttaggggttgtgcgccagatcaccccttttggtatttttgtagaagttaag
ggggttgagggcttagtccattattctgaaatcagccataaaggaccggtaaaccctgaa
aaatactacaaagagggcgatgaagtctatgtcaaagccatcgcttatgatgaagaaaaa
agacgcctttcactctccataaaagcgaccatagaagacccatgggaagagatccaagac
aagctaaaacccggatacgccattaaggtggtggtgagcaatattgaaaattatggggcg
tttgtggatattggtaatgatattgaaggctttttgcatgtttctgaaatctcttgggat
aaaaatgtcagccaccctagcaactacttgagcgtgggtcaagagattgatgtgaagatc
attgacattgatcctaaaaaccgccgcttaagggtttctttaaagcaactcactaacaga
ccttttgatgtttttgaatccaaacaccaagtgggggatgttttagaaggcaaagtggcg
actttaacggattttggggcgtttttgaatctgggtggggtggatggtttgctccacaat
cacgacgctttttgggataaagataaaaaatgcaaagaccactataaaattggcgatgtg
atcaaagtgaaaatccttaaaatcaacaaaaaagatagaaagatttctttgagcgcgaag
cacttggttacttcccctacagaagaattcgctcaaaagcataaaacagatagcgtgatt
caaggtaaagtggtgagtattaaggattttggcgttttcattaacgctgatggcattgat
gtgctcatcaaaaatgaagatttgaaccccttgaaaaaagatgaaatcaaaatagggcaa
gaaatcacatgcgtggtggttgcgattgaaaaatctaacaacaaagtgcgtgcttctgtg
cataggttagagcgcaaaaaagaaaaagaagaattgcaagcttttaacacgagcgatgat
aaaatgactttaggggatattcttaaagaaaagctctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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