KEGG   Helicobacter pylori oki102: HPOKI102_04515
Entry
HPOKI102_04515    CDS       T03182                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
hpyb  Helicobacter pylori oki102
Pathway
hpyb03030  DNA replication
hpyb03430  Mismatch repair
hpyb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpyb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPOKI102_04515
   03430 Mismatch repair
    HPOKI102_04515
   03440 Homologous recombination
    HPOKI102_04515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpyb03032]
    HPOKI102_04515
   03400 DNA repair and recombination proteins [BR:hpyb03400]
    HPOKI102_04515
Enzymes [BR:hpyb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HPOKI102_04515
DNA replication proteins [BR:hpyb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HPOKI102_04515
DNA repair and recombination proteins [BR:hpyb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HPOKI102_04515
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_3 DNA_pol3_beta_2 AbiEi_3
Other DBs
NCBI-ProteinID: AHN34855
Position
complement(919427..920551)
AA seq 374 aa
MKISVSKNELENALRYLQAFLDKKDASSIASHIHLEVIKEKLFLKASDSDIGLKSYIFTQ
SSDKEGVGTINGKKFLDIISCLKDSNIILETKDDSLVIKQNKSSFKLPMFDADEFPEFPV
IDPKVSLEVNAPFLIDAFKKIAPVIEQTSHKRELAGILMQFNQKHQTLSVVGTDTKRLSY
TQLEKVSINSTEEDISCILPKRALLEILKLFYENFSFKSDGMLAVIENETHTFFTKLIDG
NYPDYQKILPKEYTSSFTLGKEEFKESIKLCSSLSSTIKLTLEKNNALFESLDSEHSETA
KTSVEIEKGLDIEKAFHLGVNAKFFLEALNALGTTQFVLKCNEPSSPFLIQESLDEKQSH
LNAKISTLMMPITL
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaaaatcagtgttagtaaaaacgagttagaaaatgctttgcgctacttgcaagctttt
ttggataaaaaggacgcttcttctatcgcttcacacatccatttagaagtcattaaagaa
aagctttttttaaaggctagcgattccgatattgggctaaaaagctatatttttacgcaa
tctagcgataaagagggcgtaggcacgatcaatgggaaaaagtttttggatattatctca
tgtttaaaagactctaacattattttagagactaaagatgacagcttggtgatcaaacaa
aataaaagctctttcaaactccccatgtttgacgctgatgagttccctgaattccctgtt
attgatcccaaagtgagtttagaagtcaatgccccctttttaatagatgcgtttaaaaag
atcgctcctgtgattgagcaaaccagccacaaaagggaattagccggtattttaatgcaa
ttcaatcaaaagcatcaaaccctttcagtagtaggcacggataccaaacggctttcttac
acgcagttagaaaaagtctctataaattccactgaagaagatatttcttgcattttacct
aaaagagctttattagaaatccttaagcttttttatgaaaatttcagttttaaaagcgat
ggcatgttagcggtaattgaaaacgaaacgcacacttttttcaccaagctcattgatggg
aattaccctgattatcaaaaaatcctccctaaagaatacacttcttctttcacattaggc
aaggaagaatttaaagagagcattaagttatgcagttctttaagctccaccattaaactc
actttagaaaaaaacaacgctttgtttgaatctttggattctgagcatagcgaaacggct
aaaacctctgttgagattgaaaaaggtttggatattgaaaaagcctttcatttgggcgtg
aacgctaaatttttccttgaagccttaaacgctttagggacaacgcaatttgttttaaaa
tgcaatgaaccttcttcgccttttttgatccaagagtctcttgatgaaaagcaaagccac
ttgaacgctaaaatttccactttgatgatgccaatcacattataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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