KEGG   Helicobacter pylori OK310: HPOK310_0824
Entry
HPOK310_0824      CDS       T02542                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
hpyl  Helicobacter pylori OK310
Brite
KEGG Orthology (KO) [BR:hpyl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpyl03032]
    HPOK310_0824 (gyrB)
   03400 DNA repair and recombination proteins [BR:hpyl03400]
    HPOK310_0824 (gyrB)
Enzymes [BR:hpyl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HPOK310_0824 (gyrB)
DNA replication proteins [BR:hpyl03032]
 Prokaryotic type
  DNA Topoisomerases
   HPOK310_0824 (gyrB)
DNA repair and recombination proteins [BR:hpyl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HPOK310_0824 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: BAM98252
Position
complement(873404..875725)
AA seq 773 aa
MQSYQSHSIKVLKGLEGVRKRPGMYIGDTNVGGLHHMVYEVVDNAVDESMAGFCDTINIT
LTDEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKRLIMTIKKEGQIYRQEFEKGIPISELEIIGKTKSAKESGTTIEFFPDESVMEVV
EFQAGILQKRFKEMAYLNDGLKISFKEEKTQLQETYFYEDGLKQFVKDSAKKELLTPVIS
FKSMDEETRTSIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIDEN
IKTRESRPISEDIKEGLIAVVSLKMSEPLFEGQTKSKLGSSYARALVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPLESEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQESF
DIERLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTE
IYLKDSVALDHFLIEHGINSVDIEGIGKNDLMNLLKVARHYRYALLELEKRYNLLEILRF
LIETKDALSFDMKILEKSILEKLEGLNYQILRSFATEESLNLHAQTPKGLVEFNLDDNLF
KEVLFEEANYTYQKLMEYNLDFLENKDILAFLEEVENHAKKGANIQRYKGLGEMNPNDLW
ETTMHKENRSLIKLKIEDLEKTDAVFSLCMGDEVEPRRAFIQAHAKDVKQLDV
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgcaaagttaccagagccatagtattaaggttttaaaaggcttagagggggttaggaaa
cgccctggaatgtatattggcgataccaatgtgggtgggttgcaccacatggtgtatgaa
gtcgtggataacgctgtagatgagagcatggcgggtttttgcgatacgattaatatcact
ttgactgatgagggttcatgcattgtagaagataacgggcgaggcattcctgtagatatt
caccccacggaaaaaatccccgcttgcaccgtggttttaacgattttgcatgcggggggc
aagtttgataatgatacttataaagtttcaggcggtttgcatggcgtgggcgtttcggtt
gtgaacgctttaagcaaacgcttgattatgaccattaaaaaagagggtcaaatctatcgc
caggagtttgaaaagggtatccctattagcgagcttgaaatcattggcaaaaccaaaagc
gctaaagaaagcggcacgactattgaatttttccctgatgaaagcgtgatggaagtcgtt
gaatttcaagcgggtattttgcaaaagcgtttcaaagaaatggcgtatcttaacgacggc
ttaaaaatttctttcaaagaagaaaaaacccaactgcaagagacttatttctatgaagac
ggcttgaaacaattcgttaaagacagcgctaaaaaagaactgctcacccccgttatttcg
tttaaaagcatggatgaagaaacgcgcacttctatagaagtcgctctagcgtatgctgat
gattacaatgaaaacactttaagctttgtgaataatattaaaacttctgagggtggcacg
catgaggcgggctttaaaatgggcttgtctaaggcgattttacaatatattgatgaaaac
attaagacaagagaatcccgtcccatttctgaggacattaaagagggcttgattgcggtt
gtgagcttgaaaatgagcgagcctttatttgaagggcagactaaatccaaactcggtagt
tcgtatgcgcgcgcgttggtttcaaaattagtctatgataaaatccaccaatttttagaa
gaaaaccctaacgaagccaaaatcattgccaataaagcccttttagccgcaaaagccaga
gaagccagtaagaaagccagagagcttacaagaaaaaaagataatttgagtgtcggcact
ttgcctggaaaattagccgattgccagagtaaagaccccttagagagcgaaatcttttta
gtggagggcgatagcgcgggcgggagcgctaaacaagggcgcgatagggttttccaagca
attttgcccttaaaaggtaagattttaaatgtggaaaaaagccatttgtcaaaaatccta
aaatcagaagagattaaaaacatgatcacggcttttgggtgcggcattcaagagagtttt
gatatagaaagattgcgctatcataaaatcattatcatgaccgatgctgatgtggatggg
agccatatccaaaccttgctgatgacttttttctatcgttatttacgcccactgattgaa
caagggcatgtttatatcgctcaagcccctctttacaaatacaagaaaggcaagacagaa
atctatcttaaagacagcgtcgctttggatcatttcttaattgagcatggcatcaattcg
gtggatattgaagggattggcaagaacgatttgatgaatttgttaaaagtggcacgccat
taccgctacgcgcttttggaattagaaaaacgctacaatttgctagaaattttacgcttt
ttgattgaaactaaggacgccttaagctttgatatgaaaattttagaaaaaagcattttg
gaaaaattagagggattgaattaccagatcttacgctcttttgctactgaagaaagcttg
aatttgcacgcgcaaacccctaaaggcttggtggaatttaacctagatgacaacctcttt
aaagaagtgttgtttgaagaagcgaattacacttaccaaaagcttatggagtataattta
gatttcttagaaaataaggatattttggcgtttttagaagaagtggaaaatcacgctaaa
aagggagcgaatatccagcgctataaggggctaggcgagatgaaccctaatgatttgtgg
gaaacgaccatgcataaagaaaaccgcagcttaatcaaactcaaaattgaagatttagaa
aaaaccgatgcagtcttttcgctttgcatgggcgatgaagtagagcctagaagagccttt
atccaagcgcatgctaaagatgtgaagcagctagatgtgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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