KEGG   Herbaspirillum rubrisubalbicans: Hrubri_2029
Entry
Hrubri_2029       CDS       T04238                                 
Name
(GenBank) uracil-DNA glycosylase protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
hrb  Herbaspirillum rubrisubalbicans
Pathway
hrb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Hrubri_2029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hrb03400]
    Hrubri_2029
Enzymes [BR:hrb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Hrubri_2029
DNA repair and recombination proteins [BR:hrb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Hrubri_2029
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ALU89220
UniProt: A0A0U3CLD1
Position
2320691..2321695
AA seq 334 aa
MSEELKQDPGFGSSLALLDALGIGPVWVRRELAVEEAQALAPQASPPAAPAPDVEVVQAK
VVDPVALAEDVPVKPAVNAQPAAKPSAVPARPRAPIDEAHAGGPPSWLDEMDFAASMEPM
LIPDGEDDEDAPAIDPLIARIKTMDWPQLKQQVADCRRCGLCQGRKNTVFGVGDEKAKWL
FIGEGPGRNEDQQGEPFVGPAGKLLDNMLLSMGVKRGENAYIANIVKCRPTDDNGRDRPP
SPQEVASCLPYLQRQIELIQPTVLVALGKTAAISLLGMDPTTPVSRLRGTVHRYQELPLV
VTYHPAYLLRTLNDKSKAWADLCLAMSTYQAQAR
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgagtgaagaattgaaacaggatcccggcttcggctcctcgctggccctgctggatgca
ctgggcatcggcccggtatgggtgcggcgcgaactggccgtggaagaagcccaggcgctg
gcaccacaggcgtcgccgccagccgcgccagcgcctgacgttgaagtagtgcaggccaag
gtcgttgatccggttgctcttgccgaggatgtgccggttaagcctgcggtgaacgcccag
cctgccgccaagccatctgctgtacccgcacgtcctcgcgccccgatcgacgaagcgcac
gcaggtggtcctccttcgtggctggatgaaatggacttcgccgcgtcgatggagcccatg
ctcattcccgatggcgaggatgacgaagacgcgccggccatcgatccgctgatcgccagg
atcaagaccatggactggccgcagttgaagcagcaggtcgccgactgccgtcgttgcggc
ctgtgtcaggggcgcaagaataccgtgtttggcgtaggcgatgaaaaggccaaatggctc
ttcatcggcgaaggcccgggccgcaacgaggatcagcagggcgagcccttcgtcggcccg
gccggcaagctgctggacaacatgctgctgtccatgggcgtcaagcgtggcgagaacgcc
tacatcgccaacatcgtcaaatgccgccccaccgacgacaatggtcgcgaccgtcctcct
tcgccgcaggaagtggcgtcctgcctgccttacctgcagcgccagatcgagctgatccag
ccgaccgtgctggtggcactgggcaagacggccgccatttccctgctggggatggatccg
accacgccggtctcgcgcctgcgcggtaccgtgcatcgctaccaggaattgccgctggtg
gtgacctaccatccggcctacctgctgcgcacactcaatgacaagagcaaggcctgggcc
gacctgtgcctggccatgagcacctaccaggcgcaggcgcgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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