KEGG   Herbaspirillum rubrisubalbicans: Hrubri_3017
Entry
Hrubri_3017       CDS       T04238                                 
Name
(GenBank) 2-methylthioadenine synthetase protein
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
hrb  Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hrb03009]
    Hrubri_3017
Enzymes [BR:hrb01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     Hrubri_3017
Ribosome biogenesis [BR:hrb03009]
 Prokaryotic type
  ribosomal protein modification factors
   Hrubri_3017
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 TRAM CLP1_P FAM161A_B Methyltransf_2 DUF2249
Other DBs
NCBI-ProteinID: ALU90186
UniProt: A0A0U3LNU5
Position
complement(3509819..3511195)
AA seq 458 aa
MSNPSTPASPALPKVGFVSLGCPKALVDSEQILTQLRAEGYDTAKSYDGADLVIVNTCGF
IDAAVQESLDAIGEALNENGKVIVTGCLGAKKDAEGEDIIQKIHPKVLEVTGPHAVGEVM
QAVHKHLPKPHAPFIDLVPPQGVKLTPKHFAYLKISEGCNHRCSFCIIPSMRGDLVSRPI
ADVMLEAENLFKAGVKELLVISQDTSAYGVDVKFRTGFWNGKPLKTHMTQLVGALGELAQ
QYGAWVRLHYVYPYPHVDQIIPLMAEGKILPYLDVPLQHAHPDVLKRMKRPANGEKNIER
IQAWRAMCPDLTIRSTFIAGFPGETEAEFEYLLDFLKEAEIDRLGCFAYSPVEGATANEI
ANPVPEEVREERRGRVMQLQEEISKKRLQAKVGKTLRVLIDEVDRNGGTGRTYSDAPEID
GVVYVKPPFEPHRKLEVGQFVDVRISAADAHDLWGAAE
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtccaacccatctactcccgccagcccggccctgcccaaggtcggtttcgtttccctc
ggctgccccaaggcactggtcgattccgaacagatcctgacccagctgcgcgccgaaggc
tacgataccgccaagtcctatgacggcgccgacctggtgatcgtcaatacctgcggtttc
atcgacgccgccgtgcaggagtcgctggatgccatcggcgaagccctgaatgaaaacggc
aaggtgattgtcaccggctgcctgggtgccaagaaggatgccgagggcgaagacatcatc
cagaagatccatcccaaggtcttggaagtgaccggcccgcacgccgtgggcgaggtcatg
caggcggtgcacaagcacctgcccaagccccatgctcccttcatcgacctggtgccgccg
caaggggtgaagctcacccccaagcattttgcctatctgaagatttcggaaggctgcaac
catcgctgcagcttctgcatcatcccctccatgcgcggcgacctggtttcgcgccccatc
gccgatgtcatgctggaagccgagaacctgttcaaggccggagtgaaggaattgctggtg
atttcccaggacaccagcgcctatggcgtggatgtgaagttccgtaccggcttctggaat
ggcaagccgctcaagacccacatgacccaactggtgggcgcgctgggtgagctggcccag
cagtacggcgcctgggtgcgcctgcactatgtctatccgtatccgcatgtggaccagatc
atcccgctgatggccgaaggcaagatcctgccttacctggacgtgccgctgcagcacgcc
cacccggacgtgctcaagcgcatgaagcgtccggccaatggcgagaagaacatcgagcgc
atccaggcctggcgcgccatgtgcccggacctgacgatacgctcgaccttcatcgccggt
ttccccggcgagaccgaggctgagttcgaatacctgctggatttcctcaaggaggccgag
atcgaccgcctgggctgcttcgcctattccccggtggaaggcgcgaccgctaacgagatc
gccaatccagtgccagaagaggtacgcgaagaacgtcgtggccgcgtgatgcagttgcag
gaagagatctccaagaagcgcctgcaagccaaggtcggcaagaccttgcgcgtgttgatc
gatgaagtcgaccgcaacggcggcaccggtcgcacctattcggatgcgcccgagatcgat
ggcgtggtctatgtgaagccgcctttcgaaccgcatcgcaagttggaagtggggcagttc
gtcgacgtgcgcatcagcgccgccgatgcccacgacctgtggggtgcggccgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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