KEGG   Herbaspirillum rubrisubalbicans: Hrubri_3742
Entry
Hrubri_3742       CDS       T04238                                 
Name
(GenBank) VGR-related protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
hrb  Herbaspirillum rubrisubalbicans
Pathway
hrb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Hrubri_3742
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hrb02044]
    Hrubri_3742
Secretion system [BR:hrb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Hrubri_3742
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: ALU90899
UniProt: A0A0U3LMR6
Position
complement(4399913..4402636)
AA seq 907 aa
METSRPSLHQFEQWIQQSQHRRFMRLSFPHQDALAARLLVQRLDAEEHLSRDFVLRVQLI
SDDPHLALKDVMGKLLVIELVREDGTLRYFSGHVFAFCRQRADGAIVVYEAELGPWFRLL
SLRSDHYIFHDRTLLQQTEEIFADYPSHARWQWQVSANDPAMADACQFGETDHNYLCRRW
EAAGWHYWYEHDASGHTLIVGSDSRNQAAIDGDECVRFHGAAGSIEDDAIDHWSPQRQLV
ASSVALGSFDFKSPYPNWIDIPTLNQQGLAPALEHYEYTGQYGYRDLADGDAQSRLRIEE
IEARARHVQGQGNCRTLMPGRWFRLLDHFERPRFDARRQRGQDEFLILTVRHRVLNNYLP
DPEQDHPAPYRNWFSCTRRKYPWRPGRGFNSVAPYAIGSQTATVVGLPGQPALYTDAYGR
VRVQFHWDRVGQNDSGSSTWVRVASNWAGAQLGALALPRVGTEVVVQWLDGNPDRPLITG
SVYNGSHLPPWELPAQRSLSGLRSRELTDQGGNAALGRSNHLILDDTAGQMQAQLHSDQA
SSALSLGHLHRIEDHLGRKEARGQGWELRTDAWGVLRAGLGMLITTEARARARGHAKALA
ETLARLVSARQQQQRQAKLAERAAAQDGAARQAQVVDALQAQNAAIGGRAGDQEAAAQSD
FPELSAPLLVLSSPAGIAATSAGDTHLASAGDTAVTAGRHLSLSALGNFFASVRQAIRLF
IEQAGLRIVAAAGDIDLRALKDNIHLLAKLKITQTADEIILSAHQRIVINGGGSYARLDA
EGIELGTRGQFQVRASVKHFDGGKTMPVPQVDGEGMEGFNERFRVVDEFKRPLKNVRYQV
RSSSGKTWEGRSDAQGWTPYFNTDRPENLEIEILHEVDDETNDATEEAAKEEEKKAESQG
EQESSDD
NT seq 2724 nt   +upstreamnt  +downstreamnt
atggagacgtcccgtccttcccttcatcaattcgaacaatggatacagcaatcccagcat
cgtcgtttcatgcgcctgagctttccgcatcaggacgccctggcggcgcgtctgctggtg
caacgtcttgatgccgaggaacatttatcgcgcgacttcgtcttgcgcgtgcaattgatc
agtgacgatccccatctagcgctcaaggatgtgatgggaaaattgctggtcatcgaactg
gtgcgtgaggatggcaccttgcgatacttttccggccatgtctttgcgttttgccgccag
cgcgccgatggcgccatcgtggtgtacgaagcggaactggggccctggttcaggttgctg
tcgctgcgcagcgatcattatattttccacgaccggaccctgctgcagcagaccgaagaa
atcttcgccgactacccctcccatgcgcgctggcaatggcaggtcagtgccaacgatccg
gccatggccgatgcctgccagttcggcgagaccgatcacaactacctgtgccggcgctgg
gaagcggcaggctggcattactggtatgagcatgacgccagcggccacactctcatcgtc
ggcagcgacagtcgcaaccaggctgccatcgatggcgatgagtgcgtgcgttttcatggt
gctgccggcagcatcgaggacgatgccatcgatcattggtcgccgcaacgccagctggtg
gctagcagcgtggcgctgggtagcttcgacttcaaatcgccctatccgaactggatagat
attcccacactgaaccagcaaggcttggcgcctgccctggaacactacgagtacaccggc
caatacggttatcgcgacctggccgatggcgacgcccaaagccgtctgcgcatcgaggag
atcgaagcccgtgcacgccatgtccaggggcagggcaattgccgtaccctgatgccgggc
cgctggttccgtttgctggatcatttcgagcggccgcgctttgatgcgcgcaggcagcga
ggccaggatgagttcctcattctcaccgtgcgccatcgtgttctcaataattatttgccc
gatcccgagcaggaccatccagcgccttaccgcaactggttcagctgcacgcgccgcaag
tatccgtggcgccctggtcgcggcttcaatagtgtcgcgccctacgccatcggttcacag
accgcgacggtggtcggcctgcctgggcagcccgcgctgtataccgatgcctatggacgc
gtgcgcgtgcaattccactgggaccgcgtcggccagaacgacagcggcagttcgacctgg
gtgcgcgtggccagcaactgggccggcgcgcaattgggcgcgctggccttgcccagggtg
ggtacggaagtggtggtgcagtggctcgatggcaacccggatcgcccgctcatcaccggc
agcgtctacaacggcagccacctgccgccctgggaattgcccgcgcaacgcagcttgagt
ggcctgcgcagtcgtgagcttaccgatcagggcggcaatgctgcgctggggcgcagcaac
cacctgatcctggacgacaccgccggccagatgcaggcgcaattgcacagcgaccaggcc
agcagtgcgctatcgctgggccacctgcaccgcatcgaagaccacctgggccgcaaggag
gcccgcggccagggctgggaattgcgcaccgatgcctggggcgtcttgcgcgccggactc
ggaatgctgatcaccaccgaagcccgcgcgcgtgcccgaggtcatgccaaggcgctggcc
gagaccctggcgcggctggtgagtgcgcgtcagcaacagcagcgccaggccaagctggcc
gagcgtgccgcggcgcaggatggcgcggcccggcaagcccaggtggtcgatgcgctgcag
gcgcagaacgccgccattggcggccgtgccggtgaccaggaggccgcagcgcaaagcgac
ttcccggaactttccgcccccttgctggtgctctccagcccggctggcatcgccgccacc
agcgccggcgacacgcacctggccagcgctggcgataccgcagtgactgccggccggcac
ctgtcgctgtcggcgctcggaaatttctttgccagtgtgcgccaggccattcgcctgttc
attgaacaggcgggcttgcgcatcgtggctgctgcgggcgacatcgacctgcgcgcgctc
aaggacaacattcacctgctggccaagctgaagatcacccagaccgcagatgaaatcatc
ctcagcgcgcaccagcgcatcgtcatcaacggcggcggcagttatgcgcggctggacgcc
gaagggatagagctgggcacccgtgggcagtttcaggtacgggctagcgtcaagcatttc
gatggcgggaagaccatgccggtgccgcaggtggatggggaggggatggaggggtttaat
gagagattcagggtggtcgatgagttcaaacgtccgctcaagaatgtccggtaccaggtg
cgcagcagcagtggaaagacctgggagggaaggagcgatgcccaaggatggacgccctat
ttcaacactgatcggccagaaaatctggagatcgagattctgcatgaggtagatgatgag
actaatgacgcaactgaagaagcagcaaaggaagaggaaaaaaaagctgagtcgcaaggg
gaacaagaaagcagcgacgactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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