KEGG   Helobdella robusta: HELRODRAFT_109569
Entry
HELRODRAFT_109569 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
hro  Helobdella robusta
Brite
KEGG Orthology (KO) [BR:hro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hro03009]
    HELRODRAFT_109569
Enzymes [BR:hro01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     HELRODRAFT_109569
Ribosome biogenesis [BR:hro03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    HELRODRAFT_109569
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII Helicase_C_2 AAA_22 InvE_AD
Other DBs
NCBI-GeneID: 20195102
NCBI-ProteinID: XP_009012366
JGI: Helro1_109569
UniProt: T1EEV0
Position
Unknown
AA seq 575 aa
MDSWLELQPALSSPVLKTIQSFGYKCMTPVQASCIPLFLSQKDVAVEAVTGSGKTISFVV
PMLEMLLKREEPFRKHDIGALIITPTRELAIQIEGVIQGFLENMPQFTSMLLIGGNNPLA
DIEKFSKQGAHIIIGTPGRTDDFMKRDVAGLPLSASIKSLEVLILDEADRLLNMGFKNSL
NNILSFLPKQRRTGLFSATQTEEVEDLIRAGLRNPVSIVVKQTLSGVAQQVWEQKTPTTL
KNYYFICNAEDKLNYLVGFLRKHKADKIILFFSTCTCVDYFSNILQKLLKDRTILSMHGK
KGNRRNVFEKFIKLKSGILMCTDVMGRGVDIPEVAWVIQYDPPSSACNFVHRCGRTARIG
NEGSALVFLLPSEESYLKFIELNQKISLDPYSIEEKADVMEKVKKIALTDRAIYEKGLQA
YVSFVQSYAKHECNLIFRIKELNLGKLATGFGLLHLPKMPELKNVQCDFVPTQYDYSKIS
YRDKEREKCRKRKLCDEAANAQTKTKFKKNNESWSKQKEKQIKKNQRKIKKVNSKRKLDE
NDLNDLRNDAKLIKKLKSKKITKEQFDAAFRTSLT
NT seq 1728 nt   +upstreamnt  +downstreamnt
atggactcgtggttggaattgcaacctgctctatcgtcacccgttttaaaaacaattcaa
tcgttcggatacaaatgcatgacgcctgttcaggcttcctgcatacctctgttcttgagt
cagaaagatgttgcagttgaggctgtaacgggcagtggtaagacgatatcgtttgtagtt
ccaatgctggagatgttactgaagagagaagaaccttttaggaaacatgatataggtgcc
ttgataattaccccgactcgagaactggccattcaaattgagggtgtgattcaaggtttc
cttgaaaatatgccccaattcacatcgatgttattgattgggggtaacaaccctttagct
gacattgaaaagtttagtaagcaaggggcacatataatcattggcactccaggtcgcaca
gatgatttcatgaagagggatgttgctggcctgcctctgtctgcatctatcaaatcattg
gaagttttgatattggatgaggctgacagactcttgaacatggggtttaaaaacagtttg
aacaacatcttgagcttcctgccgaagcaacggagaacaggtttgttttcagcaacacag
acagaagaggttgaggatctgattcgggcaggccttcgcaatccagtttcaattgtcgtc
aaacaaactttatcaggtgttgctcaacaagtctgggaacaaaaaactccaactacatta
aaaaattattactttatttgtaatgcagaggataagctgaattatttagtaggatttctc
aggaagcacaaagccgataagatcatcctcttcttcagcacatgcacctgcgtggattac
ttttcaaatattttacaaaagctgttgaaagacagaacaattttatcgatgcatggcaag
aaaggaaaccgaaggaatgtgtttgaaaagtttataaagttgaaaagcggcatattgatg
tgtacggatgtcatgggacgaggtgtcgacattccggaggtagcttgggtcattcagtac
gacccacccagctctgcctgcaacttcgtacatcgctgtggtcgaacagctcgcattgga
aatgaaggcagtgcattggtctttttgctgccctctgaagaatcttatttgaaattcatc
gaactcaaccaaaaaatatcacttgatccctactctattgaggagaaggctgatgtaatg
gagaaggtaaaaaagatagctctcactgatagggccatctatgagaaaggtctgcaggcg
tatgtatcattcgttcaatcatatgccaaacatgaatgcaatcttatttttcgaataaaa
gagttgaatctcggtaaactagccactgggtttggtttgttgcaccttccgaaaatgcca
gaattgaaaaacgttcaatgtgattttgttcctactcaatatgactactcgaaaatttct
tacagagacaaagaaagagaaaaatgtagaaagagaaaattatgcgatgaagcagccaac
gcacaaacgaaaacaaagtttaagaaaaacaacgaatcgtggtctaagcagaaagaaaag
caaataaaaaagaaccaaaggaaaattaagaaagttaacagcaaaaggaaattagatgaa
aatgatttaaacgatcttcgtaatgacgcaaagctcattaaaaaacttaaatctaaaaaa
attacaaaagaacagtttgacgccgccttcagaacgtcgttaacttga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (45)   

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