KEGG   Helobdella robusta: HELRODRAFT_192554
Entry
HELRODRAFT_192554 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K14318  nuclear pore complex protein Nup88
Organism
hro  Helobdella robusta
Pathway
hro03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    HELRODRAFT_192554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hro03019]
    HELRODRAFT_192554
Messenger RNA biogenesis [BR:hro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     HELRODRAFT_192554
SSDB
Motif
Pfam: Nup88
Other DBs
NCBI-GeneID: 20212323
NCBI-ProteinID: XP_009021271
JGI: Helro1_192554
UniProt: T1FU27
Position
Unknown
AA seq 627 aa
MTLHKLLSAAWHPGFKSPNVLFVLTSDNSFRIYTSEHASQPVGTINLNTIMADDVVISSK
NVLGESFVAFDFGTEDLAGAMRQKKPKTTNGLNNSLVKSSDPNKSVVGSLLKNKKNNILG
YDNDLGDDYDDNCQDDDDDDDGVGGAWNIYLLMGNGQVCLCILVYSHLKFKHTLVGPLRM
YPAADDNYGCDACSIIHINSDPPVLVVATCDGKLHHCILLGSSDDDDDDDGDGCDVGGGD
DSIIRRGSYKANGKNSPAKVKTEDSSTKSLYVFETIELELQLSTPSIQSATEDPNSDSKL
NHRNGDGDFNGDDDGVCDESVPDLYNLPIMLYKDTSVRERYHCCHVTGLHSIMLPWLQKL
GAYFSSDENTKKDDDNDDAAATAATDDGGCLPLKIDDQSIVEHLICTKPLKSWTTQILRE
EYIQKINQAKNEIEKHVAKLDKAEYRQKMEVRELLENFIVIKERRSDLEKKLKRITGCKS
ELNERLKGLSYHIESDLPELSIAEKAMFKKLKSLQERVKKQEFNVTMVERQFEHNKKLMT
LPESSPSSSFASSSFVSSSSFFSSPPHSPLKTSSSSSSRPTSLSSTTSSLISSDKEVIIR
SMLLKEANEISKLVTDIKRLKNSIGPL
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgaccctacacaagctcttgtccgcagcctggcatcctgggtttaagtcacccaacgtt
ttgtttgtcctaacttccgataatagtttcagaatttacacttcggagcatgccagccag
ccagttggcactataaacctgaacacaatcatggccgacgatgttgtcatctcgtcgaaa
aatgttctaggagaatcattcgtggcttttgactttggtaccgaagatttggccggtgct
atgcggcagaaaaaaccaaaaactacaaatggtttgaataattctctagtgaaatcatcg
gatccaaacaaaagtgtggtaggcagtttgttgaaaaacaagaaaaataatatcctcggt
tatgataatgatctcggagatgattatgatgacaattgccaggatgatgatgatgatgac
gatggcgtgggaggagcctggaatatttacctcttgatgggaaatggacaggtctgtcta
tgcattctggtttatagccatttaaaattcaagcacaccctggtaggccccttgcgaatg
taccccgcggcagacgacaactacggatgcgacgcctgtagcatcatccacatcaactcc
gacccgccagtcctcgtcgtcgccacctgcgatggaaagttacatcactgtattcttctg
gggtccagtgatgatgacgatgatgatgatggtgatggttgtgacgttggtggtggtgat
gatagtattattcgtcgtgggagttataaggctaatggaaagaattccccggccaaagtt
aagacagaagatagcagcacaaaatctctgtacgtttttgagacaattgaactggagctg
cagctatcaacgccttctatacagagtgcaactgaagacccaaattccgacagcaaactc
aatcatcgtaatggtgatggcgatttcaatggcgatgatgatggtgtttgtgatgagagt
gtccccgacctttataatctgcccataatgctctacaaggacacttcagtcagagagagg
taccactgctgtcacgttaccgggctgcattccatcatgttgccatggttacagaagctg
ggagcgtatttctccagtgatgaaaatacaaagaaggatgatgacaatgacgatgctgct
gctactgctgctactgatgacggcggttgtctgccactgaagattgacgaccagtcaatt
gtagaacatctcatctgcacgaagccacttaagtcatggactacccagatcctaagagag
gagtacatacagaagattaaccaggctaagaatgagatagagaaacatgtcgcgaaatta
gacaaagcggaatacaggcagaagatggaggtcagagaactgttggagaatttcatcgtc
attaaagagagaagaagtgatctagagaagaagttgaaaagaattacagggtgcaaaagt
gaacttaacgaaaggctgaaaggtttatcataccacatcgaatccgacctgcctgagctc
tcgatagccgaaaaagccatgtttaagaagttgaagagcctccaggagagagttaagaag
caggagtttaacgttactatggttgagagacaatttgaacacaacaaaaagctaatgact
ttaccagaatcgtctccatcatcatcattcgcatcatcatcattcgtatcatcgtcatcg
tttttttcttcgcctccacactctcctctgaagacatcatcatcatcgtcatcaagacct
acatcgttatcatcaacaacatcatcacttattagtagtgataaggaagttataattaga
tcgatgctgttgaaggaagctaacgagatatccaagttggtcacggatatcaaaaggctt
aaaaattcaattggacccctttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (36)   

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