KEGG   Homo sapiens (human): 79650
Entry
79650             CDS       T01001                                 
Symbol
USB1, C16orf57, HVSL1, Mpn1, PN, hMpn1, hUsb1
Name
(RefSeq) U6 snRNA biogenesis phosphodiesterase 1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
hsa  Homo sapiens (human)
Disease
H00793  Poikiloderma with neutropenia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    79650 (USB1)
Spliceosome [BR:hsa03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    79650 (USB1)
SSDB
Motif
Pfam: HVSL
Other DBs
NCBI-GeneID: 79650
NCBI-ProteinID: NP_078874
OMIM: 613276
HGNC: 25792
Ensembl: ENSG00000103005
UniProt: Q9BQ65
Structure
Position
16:57999603..58021618
AA seq 265 aa
MSAAPLVGYSSSGSEDESEDGMRTRPGDGSHRRGQSPLPRQRFPVPDSVLNMFPGTEEGP
EDDSTKHGGRVRTFPHERGNWATHVYVPYEAKEEFLDLLDVLLPHAQTYVPRLVRMKVFH
LSLSQSVVLRHHWILPFVQALKARMTSFHRFFFTANQVKIYTNQEKTRTFIGLEVTSGHA
QFLDLVSEVDRVMEEFNLTTFYQDPSFHLSLAWCVGDARLQLEGQCLQELQAIVDGFEDA
EVLLRVHTEQVRCKSGNKFFSMPLK
NT seq 798 nt   +upstreamnt  +downstreamnt
atgagcgcggcgcccctggtgggctacagcagcagcggctccgaggatgagtccgaggac
gggatgcggaccaggccgggggatgggagccaccgtcgtggccagagcccccttcccagg
cagagatttccagtacctgacagtgtgctgaacatgttcccgggcaccgaggaggggcct
gaagatgacagcacaaaacacgggggacgggtgcgcaccttcccccacgagcgaggcaac
tgggccacccacgtctatgtaccatatgaagccaaggaggagttcctggatctgcttgat
gtgttgctgccccatgcccagacatatgtcccccggctggtaaggatgaaggtgttccac
ctcagcctgtcccagagtgtggttctgcgccaccactggatcctccccttcgtgcaggct
ctgaaagcccgtatgacctccttccacagattcttctttactgccaaccaggtaaagatt
tacaccaatcaagagaaaaccaggacctttattgggcttgaggtcacttcagggcatgcc
cagttcctggacctggtttcagaggtggacagagtcatggaggaattcaacctcaccact
ttctaccaggatccttctttccacctcagcctggcctggtgtgtgggtgatgcacgtctc
cagctggaggggcagtgcctgcaggaactacaggcaatcgtggatgggtttgaagatgct
gaggtgctgctgcgcgtgcacactgagcaagtccgctgcaagtctgggaacaagttcttc
tcgatgcctttgaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (49)   
   RefSeq(nuc) (5)   
   GenBank (22)   
   EMBL (22)   
3D Structure (5)   
   PDB (5)   
Protein domain (1)   
   Pfam (1)   
All databases (84)   

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