KEGG   Homo sapiens (human): 26160
Entry
26160             CDS       T01001                                 
Symbol
IFT172, BBS20, NPHP17, RP71, SLB, SRTD10, osm-1, wim
Name
(RefSeq) intraflagellar transport 172
  KO
K19676  intraflagellar transport protein 172
Organism
hsa  Homo sapiens (human)
Disease
H00418  Bardet-Biedl syndrome
H00527  Retinitis pigmentosa
H02157  Short-rib thoracic dysplasia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:hsa03037]
    26160 (IFT172)
Cilium and associated proteins [BR:hsa03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B2
   26160 (IFT172)
SSDB
Motif
Pfam: Clathrin WD40 ANAPC4_WD40 RPN7 Coatomer_WDAD
Other DBs
NCBI-GeneID: 26160
NCBI-ProteinID: NP_056477
OMIM: 607386
HGNC: 30391
Ensembl: ENSG00000138002
UniProt: Q9UG01
Position
2:complement(27444377..27489743)
AA seq 1749 aa
MHLKHLRTLLSPQDGAAKVTCMAWSQNNAKFAVCTVDRVVLLYDEHGERRDKFSTKPADM
KYGRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQW
PAEYIIVFGLAEGKVRLANTKTNKSSTIYGTESYVVSLTTNCSGKGILSGHADGTIVRYF
FDDEGSGESQGKLVNHPCPPYALAWATNSIVAAGCDRKIVAYGKEGHMLQTFDYSRDPQE
REFTTAVSSPGGQSVVLGSYDRLRVFNWIPRRSIWEEAKPKEITNLYTITALAWKRDGSR
LCVGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSSGTRVVLKSHYGYEVEEV
KILGKERYLVAHTSETLLLGDLNTNRLSEIAWQGSGGNEKYFFENENVCMIFNAGELTLV
EYGNNDTLGSVRTEFMNPHLISVRINERCQRGTEDNKKLAYLIDIKTIAIVDLIGGYNIG
TVSHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILNFCSYMQWVPGSDVLVA
QNRNSLCVWYNIEAPERVTMFTIRGDVIGLERGGGKTEVMVMEGVTTVAYTLDEGLIEFG
TAIDDGNYIRATAFLETLEMTPETEAMWKTLSKLALEARQLHIAERCFSALGQVAKARFL
HETNEIADQVSREYGGEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVEEAMGMYQELHR
WDECIAVAEAKGHPALEKLRRSYYQWLMDTQQEERAGELQESQGDGLAAISLYLKAGLPA
KAARLVLTREELLANTELVEHITAALIKGELYERAGDLFEKIHNPQKALECYRKGNAFMK
AVELARLAFPVEVVKLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEAALGARQWKKAI
YILDLQDRNTASKYYPLVAQHYASLQEYEIAEELYTKGDRTKDAIDMYTQAGRWEQAHKL
AMKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVQEPDLAITMYKKHKLYDDMIRLV
GKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAQEWKATVNMYRASGLWEEAYRVART
QGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAVDHAADNCSFEFAFELSRLALKHK
TPEVHLKYAMFLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQRVAEAHDPDSVA
EVLVGQARGALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEAL
QEEYEREATKKGARGVEGFVEQARHWEQAGEYSRAVDCYLKVRDSGNSGLAEKCWMKAAE
LSIKFLPPQRNMEVVLAVGPQLIGIGKHSAAAELYLNLDLVKEAIDAFIEGEEWNKAKRV
AKELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVIAALDLYVEQGQWDKCIETATKQNYK
ILHKYVALYATHLIREGSSAQALALYVQHGAPANPQNFNIYKRIFTDMVSSPGTNCAEAY
HSWADLRDVLFNLCENLVKSSEANSPAHEEFKTMLLIAHYYATRSAAQSVKQLETVAARL
SVSLLRHTQLLPVDKAFYEAGIAAKAVGWDNMAFIFLNRFLDLTDAIEEGTLDGLDHSDF
QDTDIPFEVPLPAKQHVPEAEREEVRDWVLTVSMDQRLEQVLPRDERGAYEASLVAASTG
VRALPCLITGYPILRNKIEFKRPGKAANKDNWNKFLMAIKTSHSPVCQDVLKFISQWCGG
LPSTSFSFQ
NT seq 5250 nt   +upstreamnt  +downstreamnt
atgcacttgaagcacctgaggaccctgctgagccctcaggatggagctgcaaaggtgacc
tgcatggcttggtcccagaacaatgccaaatttgctgtctgcacagtggaccgagtggtc
ttgctgtatgatgaacatggagaacggagagataaattctccaccaaaccagctgacatg
aagtatggcaggaagagctatatggtgaagggcatggctttttctcctgattccactaaa
attgccataggacagactgacaacatcatctatgtctacaagattggagaagattggggt
gacaagaaagtcatctgcaacaagttcatccagacgagtgctgtcacttgtctgcaatgg
ccggcagaatacatcattgtctttggactggctgaagggaaggttcgtttagcaaacacc
aaaactaataaatcatctaccatctatgggacagagtcttacgtggtgtccctgacaaca
aattgctctgggaaaggaattctctctggtcatgcagatggtaccatcgttaggtatttc
tttgatgatgaaggctctggagagtcacaggggaagttggttaaccacccgtgtccaccc
tatgccttggcatgggcaaccaatagcatcgtggctgcaggctgtgatcggaaaattgta
gcctatggaaaagaaggtcacatgctacaaacttttgattatagccgtgaccctcaggag
cgggagttcaccacagctgtatcaagtcctgggggccagtctgttgtgctaggaagttat
gacaggcttcgggtgttcaactggatccctcgaagaagcatctgggaagaggcaaagccc
aaggagattaccaatttatacaccatcactgccttggcctggaagcgggatggctcacgg
ctctgtgtgggcacactatgtggtggggtggaacagtttgactgctgcctccgaaggagt
atttacaagaacaagtttgagttgacgtatgtgggacctagccaggtgattgtgaagaac
ctgtcatcaggaacccgagtggtgctcaagtcacactatggctatgaggtggaagaggtg
aaaatcctaggaaaggaacgttacttggtggctcacacatcagaaacactgctgctgggg
gacctgaacactaatcggcttagtgagatagcctggcaaggatctggtggcaatgagaag
tatttctttgaaaatgagaatgtatgcatgatcttcaatgccggagagctaaccctggtg
gaatatgggaataatgacaccctgggttctgtacgcactgaattcatgaacccccacctc
atcagtgttcgtattaatgagaggtgtcagcgaggaacagaagataataagaaattggct
tatcttattgatattaagactattgctatagtggatctgattggtggctacaacattggc
accgtcagccatgagagccgtgtggattggctggaacttaatgagactggacacaagctc
ctcttcagggaccggaaacttcgtttgcatctgtatgatattgaaagctgctctaagaca
atgatcctcaacttctgctcctatatgcagtgggtcccaggaagtgacgtgctggtagct
cagaaccgaaacagtctgtgtgtatggtacaacattgaggcacctgagagagtcaccatg
ttcactattaggggtgatgttataggtctggagcggggcgggggaaagaccgaggtgatg
gtgatggaaggtgtgactactgttgcctacacattggatgagggcctcatcgagtttgga
acagccattgatgatggcaactacatccgggcaacagccttcttagagactctggaaatg
accccagaaacagaggcaatgtggaaaaccttgagtaaactggcactagaggcaaggcaa
ctacacattgcggagaggtgcttttctgctttgggccaagtagcaaaagctcgattcctg
catgagaccaatgagattgcagatcaagtatcccgggaatatggcggagaaggaacagac
ttttatcaggtccgagcacgtctagccatgctggaaaagaactacaaactggctgaaatg
atctttttggaacagaatgctgtggaggaggccatgggcatgtaccaggagctacaccgt
tgggatgagtgtatcgctgtggctgaagccaaggggcacccagccctggagaagctacgt
cgtagttactaccagtggctgatggacacacagcaagaggagcgagcaggtgaactacag
gagagccaaggggatgggctagcagccatcagcctctacctcaaagctgggctccctgcc
aaagctgctcggctggtgctgacccgagaggaactgctagccaacacagagctggtagaa
cacatcactgcagcccttatcaagggggaactctacgaaagggcaggtgatctctttgag
aagattcacaatccacagaaggccctggagtgctaccgtaaaggcaacgcattcatgaaa
gcggtagagctggctcgattggccttcccagtggaggtggtgaaactagaggaggcatgg
ggggaccacctggtgcagcagaagcagcttgatgcagccattaatcactacatcgaagcc
aggtgctccattaaggcaattgaggccgccctgggtgcccgccagtggaagaaggcaatt
tatatattagatctacaggaccggaacactgcatccaaatactatcctctcgtggcccaa
cactatgcatccctgcaggagtatgagattgctgaggagctctatactaagggagatcgg
acaaaagatgccatagacatgtacacccaggctggtcgttgggaacaagcccacaagctg
gcgatgaaatgcatgagaccagaagatgtgtcagtgctatacatcactcaggcccaggaa
atggagaagcagggcaagtaccgtgaggctgaaaggctatatgtgacagtacaagagcct
gatcttgccatcaccatgtacaaaaagcacaagttgtatgatgacatgatccgcctggta
gggaagcaccatccagatctcctcagtgatacacacctacatctgggcaaggagctggag
gctgaaggccgactacaggaggctgagtaccactacctcgaggcccaggaatggaaggca
acagtgaacatgtaccgggccagtgggctttgggaagaggcctacagggtggccagaact
caaggaggggctaatgcccacaaacacgtggcctatctgtgggcaaagagcctgggagga
gaggctgcagttagactgcttaataagctgggactcctggaagctgctgttgaccacgct
gcagacaattgctcctttgaatttgcgtttgaactctctcggctggccctcaagcacaaa
acccccgaggttcatctcaaatatgctatgttcctggaggatgagggtaaattcgaagag
gctgaagctgaattcatcagagctggtaaacccaaggaggcagtcctcatgtttgtccat
aaccaggattgggaggcagctcagcgtgtggctgaggctcacgaccctgacagtgtcgcc
gaggtgcttgtgggacaggcccggggggccttggaggagaaggactttcagaaagcagaa
gggctgctgctccgggcccagagaccaggcctggccctcaattattataaggaggctgga
ttatggagtgacgctctgcgcatctgcaaggactatgtgcccagccagctggaggctctg
caggaagaatatgagcgggaagctactaagaagggggccaggggtgtggagggatttgtg
gaacaagctcgacactgggagcaggctggagagtacagccgtgccgtggactgctacctc
aaagtgcgagactctggaaacagcggcctggcggagaagtgctggatgaaggcagctgaa
ctctccatcaagtttctgcctccccaacgtaatatggaagtcgttctggctgtaggaccc
cagctgattggaattggaaagcacagtgcagctgcagagctctatctgaatctggacctt
gtcaaggaagcaatcgatgctttcatcgagggtgaggagtggaacaaggcgaagcgtgta
gctaaggagttagatcccaggtatgaagactatgtggaccagcattataaagagttcctc
aagaatcagggcaaagtggactcgctggtgggtgtggatgtgatagctgctttggacctg
tatgtggagcagggccagtgggacaagtgcattgaaacagctaccaagcagaactacaag
attctgcacaagtatgtggctttgtatgcaactcacttgatccgggagggtagctctgcc
caggcattggccctgtatgtacagcacggagcccctgctaacccacagaacttcaatatc
tacaaaaggatcttcactgacatggtgagctctcctggaaccaactgtgccgaggcctat
catagctgggctgatcttcgagatgtcctcttcaacctgtgtgaaaacctggtgaagtcc
agtgaggcaaactctccagcccatgaggagttcaagacgatgctgctgatcgctcattac
tatgccacgcgctctgcagcccagagtgtcaaacagctggaaaccgtggctgccaggctt
tctgtttcactcttgcgtcacacccagctactacctgtagacaaagccttctatgaagca
ggcattgctgccaaggcagttggctgggataacatggcattcatcttcctcaatcgcttt
ttggacctgaccgatgcaatcgaggaagggactctagatggccttgaccactctgatttt
caggatacagacattccctttgaggtgccactcccagctaagcagcatgtaccggaggct
gagagagaagaggttcgagactgggtgcttacagtctccatggaccagcggctggagcag
gttctgcctcgggatgagcgtggcgcctacgaggcctccctagtggcagcgagcactggt
gttcgagccctgccctgccttattacaggataccccattctgaggaacaaaattgaattt
aagcggccagggaaggctgctaacaaggacaactggaataaattccttatggccatcaag
acctcccacagcccagtgtgccaggacgtgctgaaattcatcagtcagtggtgtggaggg
ctccccagcaccagcttttcctttcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (7)   
   KEGG DISEASE (3)   
   OMIM (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (24)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (22)   
DNA sequence (54)   
   RefSeq(nuc) (22)   
   GenBank (16)   
   EMBL (16)   
Protein domain (5)   
   Pfam (5)   
All databases (112)   

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