KEGG   Homo sapiens (human): 4152
Entry
4152              CDS       T01001                                 
Symbol
MBD1, CXXC3, PCM1, RFT
Name
(RefSeq) methyl-CpG binding domain protein 1
  KO
K11589  methyl-CpG-binding domain protein 1
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    4152 (MBD1)
   03036 Chromosome and associated proteins [BR:hsa03036]
    4152 (MBD1)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    4152 (MBD1)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    4152 (MBD1)
SSDB
Motif
Pfam: zf-CXXC MBD
Other DBs
NCBI-GeneID: 4152
NCBI-ProteinID: NP_001191068
OMIM: 156535
HGNC: 6916
Ensembl: ENSG00000141644
UniProt: Q9UIS9 A8K654
Structure
Position
18:complement(50266885..50281767)
AA seq 605 aa
MAEDWLDCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLT
LFDFKQGILCYPAPKAHPVAVASKKRKKPSRPAKTRKRQVGPQSGEVRKEAPRDETKADT
DTAPASFPAPGCCENCGISFSGDGTQRQRLKTLCKDCRAQRIAFNREQRMFKRVGCGECA
ACQVTEDCGACSTCLLQLPHDVASGLFCKCERRRCLRIVERSRGCGVCRGCQTQEDCGHC
PICLRPPRPGLRRQWKCVQRRCLRGKHARRKGGCDSKMAARRRPGAQPLPPPPPSQSPEP
TEPHPRALAPSPPAEFIYYCVDEDELQPYTNRRQNRKCGACAACLRRMDCGRCDFCCDKP
KFGGSNQKRQKCRWRQCLQFAMKRLLPSVWSESEDGAGSPPPYRRRKRPSSARRHHLGPT
LKPTLATRTAQPDHTQAPTKQEAGGGFVLPPPGTDLVFLREGASSPVQVPGPVAASTEAL
LQEAQCSGLSWVVALPQVKQEKADTQDEWTPGTAVLTSPVLVPGCPSKAVDPGLPSVKQE
PPDPEEDKEENKDDSASKLAPEEEAGGAGTPVITEIFSLGGTRFRDTAVWLPRSKDLKKP
GARKQ
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggctgaggactggctggactgcccggccctgggccctggctggaagcgccgcgaagtc
tttcgcaagtcaggggccacctgtggacgctcagacacctattaccagagccccacagga
gacaggatccgaagcaaagttgagctgactcgatacctgggccctgcgtgtgatctcacc
ctcttcgacttcaaacaaggcatcttgtgctatccagcccccaaggcccatcccgtggcg
gttgccagcaagaagcgaaagaagccttcaaggccagccaagactcggaaacgtcaggtt
ggaccccagagtggtgaggtcaggaaggaggccccgagggatgagaccaaggctgacact
gacacagccccagcttcattccctgctcctgggtgctgtgagaactgtggaatcagcttc
tcaggggatggcacccaaaggcagcggctcaaaacgttgtgcaaagactgtcgagcacag
agaattgccttcaaccgggaacagagaatgtttaagcgtgtgggctgtggggagtgtgca
gcctgccaggtaacagaagactgtggggcctgctccacctgcctcctgcagctgccccat
gatgtggcatcggggctgttctgcaagtgtgaacggagacgctgcctccggattgtggaa
aggagccgagggtgtggagtatgccggggctgtcagacccaagaggattgtggccattgc
cccatctgccttcgccctccccgccctggtctcaggcgccagtggaaatgtgtccagcga
cgttgcctacggggtaaacatgcccgccgcaagggaggctgtgactccaagatggctgcc
aggcggcgccccggagcccagccactgcctccaccacccccatcacagtccccagagccc
acagagccgcaccccagagccctggccccctcgccacctgccgagttcatctattactgt
gtagacgaggacgagctacagccctacacgaaccgccggcagaaccgcaagtgcggggcc
tgtgcagcctgcctacggcggatggactgtggccgctgcgacttctgctgcgacaagccc
aaattcgggggcagcaaccagaagcgccagaagtgtcgttggcgccaatgcctgcagttt
gccatgaagcggctgctgcccagtgtctggtcagagtctgaggatggggcaggatcgccc
ccaccttaccgtcgtcgaaagaggcccagctctgcccgacggcaccatcttggccctacc
ttgaagcccaccttggctacacgcacagcccaaccagaccatacccaggctccaacgaag
caggaagcaggtggtggctttgtgctgcccccgcctggcactgaccttgtgtttttacgg
gaaggcgcaagcagtcctgtgcaggtgccgggccctgttgcagcttccacagaagccctg
ttgcaggaggcccagtgctctggcctgagttgggttgtggccttaccccaggtgaagcaa
gagaaggcggatacccaggacgagtggacaccaggcacagctgtcctgacttctcccgta
ttggtgcctggctgccctagcaaggcagtagacccaggcctgccttctgtgaagcaagag
ccacctgacccagaggaggacaaggaggagaacaaggatgattctgcctccaaattggcc
ccagaggaagaggcaggaggggctggcacacccgtgatcacggagattttcagcctgggt
ggaacccgcttccgagatacagcagtctggttgccaaggtccaaagaccttaaaaaacct
ggagctagaaagcagtag

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Ontology (3)   
   KEGG BRITE (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
   PRONIT (3)   
Protein sequence (186)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (183)   
DNA sequence (225)   
   RefSeq(nuc) (183)   
   GenBank (21)   
   EMBL (21)   
3D Structure (5)   
   PDB (5)   
Protein domain (2)   
   Pfam (2)   
All databases (461)   

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