KEGG   Homo sapiens (human): 4850
Entry
4850              CDS       T01001                                 
Symbol
CNOT4, CLONE243, NOT4, NOT4H
Name
(RefSeq) CCR4-NOT transcription complex subunit 4
  KO
K10643  CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    4850 (CNOT4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    4850 (CNOT4)
   03019 Messenger RNA biogenesis [BR:hsa03019]
    4850 (CNOT4)
   04121 Ubiquitin system [BR:hsa04121]
    4850 (CNOT4)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     4850 (CNOT4)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    4850 (CNOT4)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     4850 (CNOT4)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     4850 (CNOT4)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    4850 (CNOT4)
SSDB
Motif
Pfam: zf-RING_4 RRM_1 zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 zf-CCCH_2 Rtf2 Nup35_RRM_2 Torus zf-C3HC4 zf-UDP
Other DBs
NCBI-GeneID: 4850
NCBI-ProteinID: NP_001177777
OMIM: 604911
HGNC: 7880
Ensembl: ENSG00000080802
UniProt: O95628
Structure
Position
7:complement(135361795..135510102)
AA seq 575 aa
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQ
QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
VAGEEEVKVSTMPLSTSSHSLQQGQQPTSLHTTVA
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgtctcgcagtcctgatgcgaaggaagaccctgtggagtgccctctttgcatggagccc
ttggagatagatgatatcaactttttcccttgcacctgtggctaccagatttgccgattt
tgttggcatcgaattcgcactgatgaaaatgggctttgtcctgcatgtagaaagccatat
ccagaagacccagcagtttataaaccactctcccaggaagagctgcaaaggataaagaat
gagaaaaaacagaaacaaaatgagagaaaacagaaaatatcagaaaatcgcaaacatttg
gctagtgtacgtgtcgtacaaaaaaacctcgtctttgttgtaggtttatctcagcgccta
gcagacccagaggttttaaaacgaccagaatattttgggaagtttggtaaaatacataaa
gttgtcatcaataatagcacatcatatgcaggctcacagggtccaagtgccagtgcttat
gtaacctatatccggtcagaagacgctctcagagccatacagtgtgtcaacaatgtggta
gtagatggcagaacacttaaggcatctctaggtacaacaaaatactgcagttacttctta
aagaatatgcagtgtccaaaacctgactgcatgtatcttcatgaattgggggatgaggcg
gccagcttcacaaaagaggaaatgcaggcgggtaaacaccaagaatatgaacagaagcta
cttcaagaattatataaattaaatcccaattttcttcagctatctacgggttcagttgat
aaaaataagaacaaagtgacaccactgcagaggtacgatacccccattgacaaaccttca
gattctctcagtatagggaacggtgataattcccagcagatatctaacagtgatacgcct
tcaccaccacctggtttgtcaaaatccaatccagtcatccccatcagttcatccaatcac
agtgcacggtccccttttgaaggggcagtaacagagtcacagtcgttattctcagacaat
tttcgccatcccaaccctatcccaagtgggcttcctcctttccccagctccccacagaca
tccagtgactggcctacagcaccagaaccacagagcctcttcacatcagaaacaatccca
gtatcatcctctacagactggcaagcagcttttggctttggttcttctaaacaaccagag
gatgacttgggttttgatcccttcgatgtcactcgaaaagccttagcagacctgattgag
aaggaactgtccgttcaagaccaaccttccctttcgcccacatctcttcagaactcctct
tcacacactacaaccgccaaaggtccaggctctggattcctgcatcctgctgcagctaca
aatgccaattctctcaatagtaccttttcagtcttgccccagaggttccctcaatttcag
cagcaccgagcggtttataattcattcagttttccaggccaggcagcccgctatccttgg
atggcctttccacgcaatagcatcatgcacttgaaccacacagcaaaccccacctcaaat
agtaatttcttggacttgaatctcccgccacagcacaacacaggtctgggagggatccct
gtagcaggggaagaagaggtgaaggtttcgaccatgccactgtcaacctcttcccattca
ttacaacaaggacagcagcctacaagtctccacactactgtggcctga

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