KEGG T01001: 5187

Homo sapiens (human): 5187

Entry

5187 CDS T01001

Gene name

PER1, PER, RIGUI, hPER

Definition

(RefSeq) period circadian clock 1

K02633

period circadian protein

Organism

hsa Homo sapiens (human)

Pathway

hsa04710	Circadian rhythm
hsa04713	Circadian entrainment
hsa05168	Herpes simplex infection

Brite

KEGG Orthology (KO) [BR:hsa00001]
Organismal Systems
  Environmental adaptation
   04710 Circadian rhythm
    5187 (PER1)
   04713 Circadian entrainment
    5187 (PER1)
Human Diseases
  Infectious diseases
   05168 Herpes simplex infection
    5187 (PER1)
DNA repair and recombination proteins [BR:hsa03400]
Eukaryotic Type
  Check point factors
   Other check point factors
    5187 (PER1)

SSDB

Motif

Pfam:

Period_C PAS_3 PAS_11 PAS

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

OMIM:

HGNC:

Ensembl:

Vega:

Pharos:

O15534(Tbio)

UniProt:

O15534

Position

17p13.1

AA seq 1290 aa
MSGPLEGADGGGDPRPGESFCPGGVPSPGPPQHRPCPGPSLADDTDANSNGSSGNESNGH
ESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPS
TSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQE
YYQQWSLEEGEPCSMDMSTYTLEELEHITSEYTLQNQDTFSVAVSFLTGRIVYISEQAAV
LLRCKRDVFRGTRFSELLAPQDVGVFYGSTAPSRLPTWGTGASAGSGLRDFTQEKSVFCR
IRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIF
TTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPF
DHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPAPSPAP
SLDTDIQELSEQIHRLLLQPVHSPSPTGLCGVGAVTSPGPLHSPGSSSDSNGGDAEGPGP
PAPVTFQQICKDVHLVKHQGQQLFIESRARPQSRPRLPATGTFKAKALPCQSPDPELEAG
SAPVQAPLALVPEEAERKEASSCSYQQINCLDSILRYLESCNLPSTTKRKCASSSSYTTS
SASDDDRQRTGPVSVGTKKDPPSAALSGEGATPRKEPVVGGTLSPLALANKAESVVSVTS
QCSFSSTIVHVGDKKPPESDIIMMEDLPGLAPGPAPSPAPSPTVAPDPAPDAYRPVGLTK
AVLSLHTQKEEQAFLSRFRDLGRLRGLDSSSTAPSALGERGCHHGPAPPSRRHHCRSKAK
RSRHHQNPRAEAPCYVSHPSPVPPSTPWPTPPATTPFPAVVQPYPLPVFSPRGGPQPLPP
APTSVPPAAFPAPLVTPMVALVLPNYLFPTPSSYPYGALQTPAEGPPTPASHSPSPSLPA
LAPSPPHRPDSPLFNSRCSSPLQLNLLQLEELPRAEGAAVAGGPGSSAGPPPPSAEAAEP
EARLAEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSGSHEGGS
TSASITRSSQSSHTSKYFGSIDSSEAEAGAARGGAEPGDQVIKYVLQDPIWLLMANADQR
VMMTYQVPSRDMTSVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVM
ACVDCGSSTQDPGHPDDPLFSELDGLGLEPMEEGGGEQGSSGGGSGEGEGCEEAQGGAKA
SSSQDLAMEEEEEGRSSSSPALPTAGNCTS

NT seq 3873 nt +upstreamnt +downstreamnt
atgagtggccccctagaaggggctgatgggggaggggaccccaggcctggggaatcattt
tgtcctgggggcgtcccatcccctgggcccccacagcaccggccttgcccaggccccagc
ctggccgatgacaccgatgccaacagcaatggttcaagtggcaatgagtccaacgggcat
gagtctagaggcgcatctcagcggagctcacacagctcctcctcaggcaacggcaaggac
tcagccctgctggagaccactgagagcagcaagagcacaaactctcagagcccatcccca
cccagcagttccattgcctacagcctcctgagtgccagctcagagcaggacaacccgtcc
accagtggctgcagcagtgaacagtcagcccgggcaaggactcagaaggaactcatgaca
gcacttcgagagctcaagcttcgactgccgccagagcgccggggcaagggccgctctggg
accctggccacgctgcagtacgcactggcctgtgtcaagcaggtgcaggccaaccaggaa
tactaccagcagtggagcctggaggagggcgagccttgctccatggacatgtccacctat
accctggaggagctggagcacatcacgtctgagtacacacttcagaaccaggataccttc
tcagtggctgtctccttcctgacgggccgaatcgtctacatttcggagcaggcagccgtc
ctgctgcgttgcaagcgggacgtgttccggggtacccgcttctctgagctcctggctccc
caggatgtgggagtcttctatggttccactgctccatctcgcctgcccacctggggcaca
ggggcctcagcaggttcaggcctcagggactttacccaggagaagtccgtcttctgccgt
atcagaggaggtcctgaccgggatccagggcctcggtaccagccattccgcctaaccccg
tatgtgaccaagatccgggtctcagatggggcccctgcacagccgtgctgcctgctgatt
gcagagcgcatccattcgggttacgaagctccccggataccccctgacaagaggattttc
actacgcggcacacacccagctgcctcttccaggatgtggatgaaagggctgcccccctg
ctgggctacctgccccaggacctcctgggggccccagtgctcctgttcctgcatcctgag
gaccgacccctcatgctggctatccacaagaagattctgcagttggcgggccagcccttt
gaccactcccctatccgcttctgtgcccgcaacggggagtatgtcaccatggacaccagc
tgggctggctttgtgcacccctggagccgcaaggtagccttcgtgttgggccgccacaaa
gtacgcacggcccccctgaatgaggacgtgttcactcccccggcccccagcccagctccc
tccctggacactgatatccaggagctgtcagagcagatccaccggctgctgctgcagccc
gtccacagccccagccccacgggactctgtggagtcggcgccgtgacatccccaggccct
ctccacagccctgggtcctccagtgatagcaacgggggtgatgcagaggggcctgggcct
cctgcgccagtgactttccagcagatctgtaaggatgtgcatctggtgaagcaccagggc
cagcagctttttattgagtctcgggcccggcctcagtcccggccccgcctccctgctaca
ggcacgttcaaggccaaggcccttccctgccaatccccagacccagagctggaggcgggt
tctgctcccgtccaggccccactagccttggtccctgaggaggccgagaggaaagaagcc
tccagctgctcctaccagcagatcaactgcctggacagcatcctcaggtacctggagagc
tgcaacctccccagcaccactaagcgtaaatgtgcctcctcctcctcctataccacctcc
tcagcctctgacgacgacaggcagaggacaggtccagtctctgtggggaccaagaaagat
ccgccgtcagcagcgctgtctggggagggggccaccccacggaaggagccagtggtggga
ggcaccctgagcccgctcgccctggccaataaggcggagagtgtggtgtccgtcaccagt
cagtgtagcttcagctccaccatcgtccatgtgggagacaagaagcccccggagtcggac
atcatcatgatggaggacctgcctggcctagccccaggcccagcccccagcccagccccc
agccccacagtagcccctgacccagccccagacgcctaccgtccagtggggctgaccaag
gccgtgctgtccctgcacacacagaaggaagagcaagccttcctcagccgcttccgagac
ctgggcaggctgcgtggactcgacagctcttccacagctccctcagcccttggcgagcga
ggctgccaccacggccccgcacccccaagccgccgacaccactgccgatccaaagccaag
cgctcacgccaccaccagaaccctcgggctgaagcgccctgctatgtctcacacccctca
cccgtgccaccctccaccccctggcccaccccaccagccactacccccttcccagcggtt
gtccagccctaccctctcccagtgttctctcctcgaggaggcccccagcctcttccccct
gctcccacatctgtgcccccagctgctttccccgcccctttggtgaccccaatggtggcc
ttggtgctccctaactatctgttcccaaccccatccagctatccttatggggcactccag
acccctgctgaagggcctcccactcctgcctcgcactccccttctccatccttgcccgcc
ctcgccccgagtcctcctcaccgcccggactctccactgttcaactcgagatgcagctct
ccactccagctcaatctgctgcagctggaggagctcccccgtgctgagggggctgctgtt
gcaggaggccctgggagcagtgccgggcccccacctcccagtgcggaggctgctgagcca
gaggccagactggcggaggtcactgagtcctccaatcaggacgcactttccggctccagt
gacctgctcgaacttctgctgcaagaggactcgcgctccggcacaggctccgcagcctcg
ggctccttgggctctggcttgggctctgggtctggttcaggctcccatgaagggggcagc
acctcagccagcatcactcgcagcagccagagcagccacacaagcaaatactttggcagc
atcgactcttccgaggctgaggctggggctgctcggggcggggctgagcctggggaccag
gtgattaagtacgtgctccaggatcccatttggctgctcatggccaatgctgaccagcgc
gtcatgatgacctaccaggtgccctccagggacatgacctctgtgctgaagcaggatcgg
gagcggctccgagccatgcagaagcagcagcctcggttttctgaggaccagcggcgggaa
ctgggtgctgtgcactcctgggtccggaagggccaactgcctcgggctcttgatgtgatg
gcctgtgtggactgtgggagcagcacccaagatcctggtcaccctgatgacccactcttc
tcagagctggatggactggggctggagcccatggaagagggtggaggcgagcagggcagc
agcggtggcggcagtggtgagggagagggctgcgaggaggcccaaggcggggccaaggct
tcaagctctcaggacttggctatggaggaggaggaagaaggcaggagctcatccagtcca
gccttacctacagcaggaaactgcaccagctag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   UniGene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (9)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (29)   
   RefSeq(nuc) (3)   
   GenBank (13)   
   EMBL (13)   
Protein domain (4)   
   Pfam (4)   
All databases (65)   

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