KEGG   Homo sapiens (human): 5393
Entry
5393              CDS       T01001                                 
Symbol
EXOSC9, PCH1D, PM/Scl-75, PMSCL1, RRP45, Rrp45p, p5, p6
Name
(RefSeq) exosome component 9
  KO
K03678  exosome complex component RRP45
Organism
hsa  Homo sapiens (human)
Pathway
hsa03018  RNA degradation
Disease
H00897  Pontocerebellar hypoplasia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    5393 (EXOSC9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    5393 (EXOSC9)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     5393 (EXOSC9)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 5393
NCBI-ProteinID: NP_005024
OMIM: 606180
HGNC: 9137
Ensembl: ENSG00000123737
UniProt: Q06265
Structure
Position
4:121801323..121817021
AA seq 439 aa
MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS
CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTES
LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEER
DPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGI
MLLKDQVLRCSKIAGVKVAEITELILKALENDQKVRKEGGKFGFAESIANQRITAFKMEK
APIDTSDVEEKAEEIIAEAEPPSEVVSTPVLWTPGTAQIGEGVENSWGDLEDSEKEDDEG
GGDQAIILDGIKMDTGVEVSDIGSQDAPIILSDSEEEEMIILEPDKNPKKIRTQTTSAKQ
EKAPSKKPVKRRKKKRAAN
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgaaggaaacgccactctcaaactgcgaacgccgcttcctactccgtgccatcgaagag
aagaagcggctggatggcagacaaacctatgattataggaacatcaggatctcatttgga
acagattacggatgctgcattgtggaacttggaaaaacaagagttcttggacaggtttcc
tgtgaacttgtgtctccaaaactcaatcgggcaacagaaggtattcttttttttaacctt
gaactctctcagatggccgctccagctttcgaacctggcaggcagtcagatctcttggtg
aagttgaatcgactcatggaaagatgtctaagaaattcgaagtgtatagacactgagtct
ctctgtgttgttgctggtgaaaaggtttggcaaatacgtgtagacctacatttattaaat
catgatggaaatattattgatgctgccagcattgctgcaatcgtggccttatgtcatttc
cgaagacctgatgtctctgtccaaggagatgaagtaacactgtatacacctgaagagcgt
gatcctgtaccattaagtatccaccacatgcccatttgtgtcagttttgcctttttccag
caaggaacatatttattggtggatcccaatgaacgagaagaacgtgtgatggatggcttg
ctggtgattgccatgaacaaacatcgagagatttgtactatccagtccagtggtgggata
atgctactaaaagatcaagttctgagatgcagtaaaatcgctggtgtgaaagtagcagaa
attacagagctaatattgaaagctttggagaatgaccaaaaagtaaggaaagaaggtgga
aagtttggttttgcagagtctatagcaaatcaaaggatcacagcatttaaaatggaaaag
gcccctattgatacctcggatgtagaagaaaaagcagaagaaatcattgctgaagcagaa
cctccttcagaagttgtttctacacctgtgctatggactcctggaactgcccaaattgga
gagggagtagaaaactcctggggtgatcttgaagactctgagaaggaagatgatgaaggc
ggtggtgatcaagctatcattcttgatggtataaaaatggacactggagtagaagtctct
gatattggaagccaagatgctcccataatactctcagatagtgaagaagaagaaatgatc
attttggaaccagacaagaatccaaagaaaataagaacacagaccaccagtgcaaaacaa
gaaaaagcaccaagtaaaaagccagtgaaaagaagaaaaaagaagagagctgccaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (28)   
   RefSeq(nuc) (6)   
   GenBank (11)   
   EMBL (11)   
3D Structure (4)   
   PDB (4)   
Protein domain (2)   
   Pfam (2)   
All databases (59)   

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